DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tead1 and sd

DIOPT Version :9

Sequence 1:NP_001160056.2 Gene:Tead1 / 21676 MGIID:101876 Length:451 Species:Mus musculus
Sequence 2:NP_001368984.1 Gene:sd / 32536 FlyBaseID:FBgn0003345 Length:747 Species:Drosophila melanogaster


Alignment Length:470 Identity:261/470 - (55%)
Similarity:307/470 - (65%) Gaps:98/470 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PSSW----------------SGSESPAENME--RMSDSADKPIDNDAEGVWSPDIEQSFQEALAI 49
            ||.|                :||...::|::  .|||........||||||||||||||||||:|
  Fly    43 PSPWTPVNAGPPGALGSADTNGSMVDSKNLDVGDMSDDEKDLSSADAEGVWSPDIEQSFQEALSI 107

Mouse    50 YPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREIQAAIKVSSH 114
            ||||||||||||||||||||||||||||||||||||||||||||||||||:|:|||||.|||.  
  Fly   108 YPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQAKIKVQ-- 170

Mouse   115 IQVLARRKSRDFHSKLKVTSMDQTAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGGP 179
                                                                             
  Fly   171 ----------------------------------------------------------------- 170

Mouse   180 GFW-PGMIQTGQPGSSQDVKPFVQQAYPIQPAVTAPIPGFEPTSAPAPSVPAWQGRSIGTTKLRL 243
             || ||:    ||.:|||:|||.|..||.....|| :.|.| |..|...:| |:||:|.|.|.||
  Fly   171 -FWQPGL----QPSTSQDIKPFPQPPYPAGKTSTA-VSGDE-TGIPPSQLP-WEGRAIATHKFRL 227

Mouse   244 VEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQN 308
            :||:||:|.||| :.|::||||.:| ...|:||||||:||||||:||||||.||||:|:.|||||
  Fly   228 LEFTAFMEIQRD-EIYHRHLFVQLG-GKPSFSDPLLETVDIRQIFDKFPEKSGGLKDLYEKGPQN 290

Mouse   309 AFFLVKFWADLNCNIQ--DDAGAFYGVSSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFEN 371
            ||:|||.|||||.::.  .:.|.||||:|||||:||:.:.|||.|||||||||||||:||:|.||
  Fly   291 AFYLVKCWADLNTDLTTGSETGDFYGVTSQYESNENVVLVCSTIVCSFGKQVVEKVESEYSRLEN 355

Mouse   372 GRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSN 436
            .|:||||.||||||||||||.|||:|||:|||||||||||||.|:..|:|||||||:|.||||:.
  Fly   356 NRYVYRIQRSPMCEYMINFIQKLKNLPERYMMNSVLENFTILQVMRARETQETLLCIAYVFEVAA 420

Mouse   437 SEHGAQHHIYRLVKD 451
            ...|..||||||:|:
  Fly   421 QNSGTTHHIYRLIKE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tead1NP_001160056.2 TEA 30..97 CDD:128703 65/66 (98%)
sdNP_001368984.1 TEA 88..155 CDD:128703 65/66 (98%)
YBD 224..432 CDD:407601 144/209 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847736
Domainoid 1 1.000 298 1.000 Domainoid score I1450
eggNOG 1 0.900 - - E1_KOG3841
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2418
Inparanoid 1 1.050 465 1.000 Inparanoid score I1528
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52403
OrthoDB 1 1.010 - - D355519at33208
OrthoFinder 1 1.000 - - FOG0001013
OrthoInspector 1 1.000 - - otm43938
orthoMCL 1 0.900 - - OOG6_103264
Panther 1 1.100 - - O PTHR11834
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2507
SonicParanoid 1 1.000 - - X674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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