DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdx2 and Prx2540-2

DIOPT Version :9

Sequence 1:NP_001304314.1 Gene:Prdx2 / 21672 MGIID:109486 Length:198 Species:Mus musculus
Sequence 2:NP_523683.1 Gene:Prx2540-2 / 36098 FlyBaseID:FBgn0033518 Length:220 Species:Drosophila melanogaster


Alignment Length:204 Identity:66/204 - (32%)
Similarity:100/204 - (49%) Gaps:27/204 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 QIGKSAPDFTATAVVDGAFKEIKLSDYRG-KYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGC 70
            ::|::.|:|.|    |.....||..:::| .:||||.:|.|||.||.||:...:.|..:|.|...
  Fly     2 RLGQTVPNFEA----DTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRNT 62

Mouse    71 EVLGVSVDSQFTHLAWIN--------TPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDE----- 122
            :.|..|||:..:|:.|:|        .|      |....|::||.|:.|:.:.|:|..::     
  Fly    63 KCLAHSVDALNSHVDWVNDIKSYCLDIP------GDFPYPIIADPTRDLAVSLGMLDEEQKKDPE 121

Mouse   123 -GIAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVC-PAGWKPGSDT-IK 184
             |...|.||||.....:|......:..||:|||.||.:.:.|.||....|. ||.|.||:.. |.
  Fly   122 VGKTIRALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMIL 186

Mouse   185 PNVDDSKEY 193
            |.|.|.:.:
  Fly   187 PTVTDEEAH 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdx2NP_001304314.1 PTZ00253 1..195 CDD:140280 66/204 (32%)
PRX_Typ2cys 8..179 CDD:239313 60/186 (32%)
Prx2540-2NP_523683.1 AhpC 1..194 CDD:223527 66/201 (33%)
PRX_1cys 3..218 CDD:239314 66/203 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835445
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.640

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