DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a8 and CG33124

DIOPT Version :9

Sequence 1:NP_663398.2 Gene:Slc5a8 / 216225 MGIID:2384916 Length:611 Species:Mus musculus
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:609 Identity:201/609 - (33%)
Similarity:326/609 - (53%) Gaps:71/609 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MDASRDIGSFVVWDYVVFAGMLLISAAIGIYY--------------------AFAGGGQQTSKDF 45
            ||..|    |...||.||.|:.::|.|||:|:                    :....|.:...::
  Fly     1 MDTYR----FGTVDYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEY 61

Mouse    46 LMGGRSMSAVPVALSLTASFMSAVTVLGTPAEVYRFGAIFSIFVITYFFVVVISAEVFLPVFYRL 110
            |||...:...|||:||.|||:|.|.:||.|:|:|.:|..:|:.|:......:..:.::||||..|
  Fly    62 LMGSGHLKVFPVAMSLIASFISGVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSAL 126

Mouse   111 GITSTYEYLELRFNRCIRLCGTILFIVQTILYTGIVIYAPALALNQVTGFDLWGAVVATGVVCTF 175
            .:.|:||||.:||:..||...:|:|:::.:|||..|::.|||||||.:|.::....|...|||..
  Fly   127 QVRSSYEYLGMRFHPLIRNIVSIMFVIEVLLYTPFVVFVPALALNQASGLNIHMIEVLIIVVCVI 191

Mouse   176 YCTLGGLKAVVWTDVFQVGIMVAGFASVIIQASITQHGINKILSDAF----NGGRLNFWNFDPNP 236
            |..||||||||.||::||.||   ||||::.|.:....|.. |.|.|    :||||.|.|.:|:|
  Fly   192 YTLLGGLKAVVHTDIWQVVIM---FASVVVVAILATCYITD-LDDFFESLVDGGRLIFGNINPSP 252

Mouse   237 LQRHTFWTIVIGGTFTWTTIYGVNQSQVQRYISCKSRLHAKLSLYVNLVGLWVILTCSIFCGLAL 301
            ..|:|.|::||||.|.||:|..|:|:.|.||:|..:...|:.|:...::|..:..:...|.||.:
  Fly   253 YVRNTVWSVVIGGAFYWTSITAVHQTMVHRYMSLPNLKMARTSIAFFVLGSIIFYSVLSFLGLLI 317

Mouse   302 YSRYRECDPWTSKKVSAIDQLMPYLVLDILKNYPGVPGLFVACAYSGTLSTVSSSINALAAVTVE 366
            ::.|::|||.::.::...|||:|..|:..:.:..|:||||:|..:...||::|..:|:.:.|.::
  Fly   318 FNMYKDCDPLSAGQIMNNDQLVPLFVVQSVGHIYGIPGLFIAGIFGAGLSSLSVFLNSTSLVILQ 382

Mouse   367 DLIKPRFK-SLSEKSLSWISQGMSVLYGALCIGMAALASLMGALLQAALSIFGMVGGPLLGLFSL 430
            |:::..|| ...|.:.:.|.:...|:.|||..|...|...:..:|...:|:..:......|:|:|
  Fly   383 DIVRGCFKMQPGETASAIIVKATIVIMGALVFGEVLLLEKVSGILSICMSLVAIATSSTFGIFTL 447

Mouse   431 GILVPFANSIGALTGLLAGFAISLWVGIGAQLYP---PLPERTLPLPLETYGCNITHNGSDWMST 492
            .:|||:||::|...|.:|||.::.|:..|:|:..   .|....||:.:.:...|:|...:.|:..
  Fly   448 AVLVPWANTVGTAVGGIAGFLLTGWITFGSQIAAASGQLHHHRLPVSVASCPGNVTARENVWVDE 512

Mouse   493 TEMPFSTSAFQIHNAERTPLMDNWYSLSYLYFSTIGTLTTLFVGILISLSTGGRK-QNLDP---- 552
            .::              .||    :.||:.:.:.||.||.:.||.|:||.|.... ::||.    
  Fly   513 EQV--------------FPL----FRLSFHWINPIGALTVVVVGSLVSLVTKPTDIKSLDSDLIS 559

Mouse   553 ----RFLLTKQDFLSNFDVFKKRN 572
                |||..        :.||:||
  Fly   560 PVIHRFLPK--------ECFKQRN 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a8NP_663398.2 SLC5sbd_SMCT1 7..549 CDD:271402 189/570 (33%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 180/545 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836528
Domainoid 1 1.000 46 1.000 Domainoid score I12033
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4891
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.800

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