DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tcf7 and pan

DIOPT Version :9

Sequence 1:XP_030101626.1 Gene:Tcf7 / 21414 MGIID:98507 Length:516 Species:Mus musculus
Sequence 2:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster


Alignment Length:585 Identity:183/585 - (31%)
Similarity:241/585 - (41%) Gaps:180/585 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse    91 TSQRLFPDKLPESLEDGLKAPECASGMYKET---------VYSAFNLLMPYPPASGAGQ------ 140
            |....:.|.:....|:...||.|.....::|         ..:|..:::.|...|.:..      
  Fly   437 TPHESYSDSVKSDCEESNSAPTCIWHSTRQTFRHKKDVEPCSTAAEIILEYASLSSSSNIETSRL 501

Mouse   141 --------------HPQPQPPL---HNKPGQPPHGV--PQLSPLYEHFSSPHPTPAPADIS---- 182
                          :...|.|:   :|:.......|  |.|.|   .||:...||:....|    
  Fly   502 LTSASNLTDVTENYNVTTQLPIVFNYNRESSAESIVTDPLLVP---EFSTAPSTPSTGSNSGCST 563

Mouse   183 -------------QKQGVHRPLQTPDLSGFYS---------------LTSGSMGQLP-------- 211
                         :||.:.|.::|...:.|.|               .||.|:..||        
  Fly   564 GMVSGIFGLSQNRRKQRLARHIETLTTNSFKSNAIRGNVDNEITNQLKTSPSIRALPTENVSHLI 628

Mouse   212 -HTVSWPSPPL--YPLSPSCGYRQHFPAPTAAPGAP----YPRFTHP-SLMLGSGVPGHPAAIPH 268
             .|:|..:..|  ..||.:..:::...|.....|:.    :|....| .|.:||..........|
  Fly   629 TKTLSSANASLTAQELSITNLFKERLCALQGNAGSMKTEIFPMIDAPYDLSIGSKTKHMNLEAKH 693

Mouse   269 PAIVPSSGKQELQPYDRNLKTQAEPKAEKEAKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESAA 333
            .:               |.::....:...:.|||.|||||||||||||||||||:||||||||||
  Fly   694 TS---------------NAQSNESKETTNDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAA 743

Mouse   334 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTDPG-- 396
            ||||||||||.||||||:||||.||:||||||:||||||||||||...::.:.|...||||.|  
  Fly   744 INQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRSTTDSGGN 808

Mouse   397 SPKKCRARFGLNQQTDWCGPCRRKKKCIRYL-------PGE-GRCPSPVPS----------DDSA 443
            :.|||||||||:||:.||.|||||||||||:       |.| |.|.....|          ||..
  Fly   809 NMKKCRARFGLDQQSQWCKPCRRKKKCIRYMEALNGNGPAEDGSCFDEHGSQLSDDDEDDYDDDK 873

Mouse   444 LGCPRSPAP-----QDSPSYLLLPSFP----------------TELLASPVE-----------PA 476
            ||.....|.     :|..|..|..|.|                |..||||:.           ||
  Fly   874 LGGSCGSADETNKIEDEDSESLNQSMPSPGCLSGLSSLQSPSTTMSLASPLNMNANSATNVIFPA 938

Mouse   477 ------------------PTF-------SGRSAAL-TLPAPKSPKTPHSTLQNPQIQQQESQRQA 515
                              ||.       ||.:::: |.|...|..:|.:.:..|.:  ..||.:|
  Fly   939 SSNALLIVGADQPTAQQRPTLVSTSGSSSGSTSSISTTPNTSSTVSPVTCMTGPCL--GSSQERA 1001

Mouse   516  515
              Fly  1002  1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcf7XP_030101626.1 CTNNB1_binding 20..216 CDD:369826 34/199 (17%)
SOX-TCF_HMG-box 304..374 CDD:238684 63/69 (91%)
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 63/70 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4984
eggNOG 1 0.900 - - E1_KOG3248
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm44316
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10373
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.960

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