Protein Alignment Tcea1 and TfIIS

DIOPT Version :9

• Sequence 1: NP_001153223.1
• Gene: Tcea1 / 21399
• MGIID: 1196624
• Length: 312
• Species: Mus musculus
• Sequence 2: NP_001260457.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Alignment Length: 296
• Identity: 154/296 - (52%)
• Similarity: 203/296 - (68%)
• Gaps: 17/296 - (5%)

Mouse    30 TQQAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPS-- 92
            |.|..||||||.|:.:.:.|::|..|||||:||.|||.|.|:||.:|||:|||:||:.|..|:
  Fly    22 TGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPT 86

Mouse    93 ----------TDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPST 147
                      :..:....|...|..|.:|...:::|||||: |..|::..:..:..:|||....|
  Fly    87 TPNNSSAKEGSSNNSSASKSTSAAKSSSSISGKDKSSSSSS-SKDKEKKGSTSSSQTSFPSGGMT 150

Mouse   148 SDSVRLKCREMLAAALRTGDDYVAIGADE-EELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKD 211
             |:||:|||||||.||:.|:  |..|..| ||:.:::|:|||.|..|||||||||:|||::||||
  Fly   151 -DAVRIKCREMLATALKIGE--VPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKD 212

Mouse   212 AKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGK 276
            .|||.||.|.:||.:.....|:||.|||||||:|::|:...||||.:.|:|...||:|||..|.|
  Fly   213 PKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAK 277

Mouse   277 CKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 312
            |||:||||.|:|||||||||||||:|||||||||||
  Fly   278 CKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tcea1	NP_001153223.1	TFSII	33..312	CDD:273592	150/291 (52%)
		TFIIS_I	<35..89	CDD:238107	31/53 (58%)
		TFIIS_M	149..256	CDD:284835	61/107 (57%)
		Zn-ribbon_TFIIS	265..311	CDD:259796	36/45 (80%)
TfIIS	NP_001260457.1	TFSII	5..313	CDD:273592	152/294 (52%)
		TFS2N	7..82	CDD:197766	34/59 (58%)
		TFIIS_M	151..257	CDD:284835	61/107 (57%)
		Zn-ribbon_TFIIS	266..312	CDD:259796	36/45 (80%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	128	1.000	Domainoid score	I5287
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	305	1.000	Inparanoid score	I2612
Isobase	1	0.950	-	0	Normalized mean entropy	S1233
OMA	1	1.010	-	-		QHG53988
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001112
OrthoInspector	1	1.000	-	-		otm43325
orthoMCL	1	0.900	-	-		OOG6_101177
Panther	1	1.100	-	-	LDO	PTHR11477
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2312
SonicParanoid	1	1.000	-	-		X770
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.810