DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbx6 and byn

DIOPT Version :9

Sequence 1:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:412 Identity:131/412 - (31%)
Similarity:183/412 - (44%) Gaps:115/412 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    93 LSLENQELWKEFSAVGTEMIITKAGRRMFPACRVSVTGLDPEARYLFLLDVVPVDGARYRWQGQH 157
            :||:::|||..|..:..|||:||.||||||..::|.:||||.|.|..||:.|.:|..|:::....
  Fly    89 ISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGE 153

Mouse   158 WEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHL 222
            |.|.||||....:.:|:||:||..|||||::|:||.:|||||.| :.:|.::|:|:|||:||:||
  Fly   154 WVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLHKYEPRVHL 217

Mouse   223 VRATQLCSQHWGGVASFRFPETTFISVTAYQNPRITQLKIAANPFAKGFRENGRNCKRERDARVK 287
            ||.... .:|   |.::.||||.||:||||||..:|.|||..|||||.|.:     .:||     
  Fly   218 VRVGSE-QRH---VVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD-----AKER----- 268

Mouse   288 RKLRGPEPVATEACGSGDTPGGPCDSTLGGDIRDSDPEQAPTPQEAASASAPPCGGPSAEAYLLH 352
                 |:.:.            |.|:..|..|   .|....|...||.|:.||          |.
  Fly   269 -----PDTLY------------PHDTHYGWLI---PPPTHYTAAAAAVAAPPP----------LS 303

Mouse   353 PAAFHGAPSHLPARTPSFAEAPD------------------PGRPAPYSAAFLDLQPGPGGSAYQ 399
            .|..||..:..|:.:.:.:..|.                  |.|..|||...:....|..|||..
  Fly   304 IAQSHGLVASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGN 368

Mouse   400 A---------------------------------------APSVPSFAPHFIQGG---------- 415
            |                                       |||...|:..:.|.|          
  Fly   369 ASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMSVDASPTA 433

Mouse   416 ---PFPLPYPGPGGYLDMGSKP 434
               .:|..:...|.|.:..|.|
  Fly   434 SVFSYPSSWQSNGNYWNATSVP 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 90/183 (49%)
bynNP_524031.2 TBOX 86..268 CDD:238106 90/188 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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