DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbx6 and Doc1

DIOPT Version :9

Sequence 1:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus
Sequence 2:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster


Alignment Length:387 Identity:160/387 - (41%)
Similarity:214/387 - (55%) Gaps:56/387 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    37 RYPDLDTSKLDCFLSGIEAAPHTLAAAAPLPLLPSALGPETAPPPPEALHSLPGVSLSLENQELW 101
            |.||...|.|          |..:....|..:|||.             .:||||...|||.:||
  Fly    28 RIPDPFPSML----------PFNMPHQQPHMMLPSR-------------PTLPGVEAKLENNDLW 69

Mouse   102 KEFSAVGTEMIITKAGRRMFPACRVSVTGLDPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEP 166
            ::|..:||||||||:||||||:.|||::||:.||.|..||::||:...||::.|..|.|:|.|||
  Fly    70 QQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEP 134

Mouse   167 RLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQ 231
            :.|.|:|:|||||||||||..|.:.|::|||||:|||..||::|.||||||||:|::|:::|...
  Fly   135 QSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQL 199

Mouse   232 HWGGVASFRFPETTFISVTAYQNPRITQLKIAANPFAKGFRENGRNCKRERDARVKRKLR--GPE 294
            .|....:|.||||.|::||||||.|||:|||..|||||||||:|:       :|.||||.  |..
  Fly   200 PWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQ-------SRCKRKLNSSGNS 257

Mouse   295 PVATEACGSGDTPGGPCDSTLGGDIR-DSDPEQAPTPQEAASASAPPCGGPSAEAYLLHPAAFHG 358
            .:.:|..||..:   .|||......| |.:.:...:...|...:..|...|.: .||.|..::  
  Fly   258 TLESEDDGSSVS---SCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMS-PYLRHHLSY-- 316

Mouse   359 APSHLPARTPSFAEA------PD--PGRPAPYSAAFLDLQP---GPGGSAYQAAPSVPSFAP 409
            .||......||.|.|      |.  |..||.|:.....:.|   .|.||      |.|:.:|
  Fly   317 GPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGS------STPTTSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 110/186 (59%)
Doc1NP_648283.1 TBOX 58..245 CDD:238106 110/193 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831462
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3037
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm43723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.850

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