DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx6 and bi

DIOPT Version :9

Sequence 1:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:587 Identity:180/587 - (30%)
Similarity:240/587 - (40%) Gaps:190/587 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 HPRELYPSLGTGYRLGHPQPGADSTFPPALTEGYRYPDLDTSKLDCFLSGIEAAPHTL-AAAAPL 66
            || .|||  |.|.|.....|||   .|.|...|..|    |:..|..|:  .|..|.| .|..||
  Fly   262 HP-GLYP--GGGLRFPPHHPGA---HPHAHHLGSAY----TTAEDVVLA--SAVAHQLHPAMRPL 314

Mouse    67 PLLPSALGPETAPPPPEALHSLPGV----SLSLENQELWKEFSAVGTEMIITKAGRRMFPACRVS 127
                .||.||.           .||    .::||.::||::|..:||||:|||:||:|||..:..
  Fly   315 ----RALQPED-----------DGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFR 364

Mouse   128 VTGLDPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSF 192
            |:|||.:|:|:.|||:|..|..||::....|..:|||:|.:|.|:|||||||.||..||::.|||
  Fly   365 VSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSF 429

Mouse   193 HRVKLTNSTLDPHGHL---ILHSMHKYQPRIHLVRATQLCSQHWGGVASFRFPETTFISVTAYQN 254
            |::||||:..|.||.:   ||:||||||||.|||||..:....:....::.|.||.||:||||||
  Fly   430 HKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQN 494

Mouse   255 PRITQLKIAANPFAKGFRENGRNCKRERDARVKRK------------------------------ 289
            .:||||||..||||||||:.|...:.::.|.:..:                              
  Fly   495 EKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHL 559

Mouse   290 -------------------LRGP---------------------------------------EPV 296
                               :.||                                       |..
  Fly   560 HPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHA 624

Mouse   297 ATEACGSG-----------------DTPGGPCDSTLGGDIRDS-DPEQAPTPQEAASASAP---- 339
            |..|..:.                 |.....|..::||....: .|....:|:||..|:|.    
  Fly   625 AAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAA 689

Mouse   340 ---PCGG--PSAEAYL---LHPAAF-------HG--APSHL-----PARTPSFAEAP-DPGRPAP 381
               |.||  ||....:   :||:..       ||  .|.||     ||...:.:.|. :||....
  Fly   690 GLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFN 754

Mouse   382 YSAAFLDLQPGPGGSAYQAAPSVP----------SFAPHFIQ---GGPFPLPYPG---------P 424
            ...|.....|...|.||.||...|          .|:|:.:.   |..|....||         |
  Fly   755 AQLALAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRSGDPP 819

Mouse   425 GG 426
            ||
  Fly   820 GG 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 102/193 (53%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 25/71 (35%)
T-box 330..513 CDD:279278 98/182 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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