DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx5 and bi

DIOPT Version :9

Sequence 1:XP_006530342.1 Gene:Tbx5 / 21388 MGIID:102541 Length:537 Species:Mus musculus
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:543 Identity:181/543 - (33%)
Similarity:240/543 - (44%) Gaps:140/543 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MHPPVQSENLARAQEPLRTMADTDEGFGLARTPLEPDSKDRSCDSKPESALGAPSKSPSSPQAAF 65
            :||         |..|||.:...|:|.                                      
  Fly   307 LHP---------AMRPLRALQPEDDGV-------------------------------------- 324

Mouse    66 TQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADD 130
                ::..||.|..::||.|||::||||:|||:||:|||..|.:|:||:.|.|||||:|||.|||
  Fly   325 ----VDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADD 385

Mouse   131 HRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHI---IL 192
            :||||.:::|.|.|||:|.||.|:|:|||||.||..||:::|||.|||||||..|..|.:   ||
  Fly   386 YRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTIL 450

Mouse   193 NSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGF-- 255
            |||||||||.|:|:|  |:......:.|.|:||.||.|||||:|||.|||||||:||||||||  
  Fly   451 NSMHKYQPRFHLVRA--NDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRD 513

Mouse   256 ---------------RGSDDLELHRMSRMQSKEYPVVPRSTVRHKVTSNHSPFSSETRALSTSSN 305
                           ||||..:|: .:.:.|...|:       |...:...|......||     
  Fly   514 TGAGKREKKQALMSNRGSDSDKLN-PTHVSSSRAPL-------HLGHAGRPPHLHPHAAL----- 565

Mouse   306 LGSQYQCEN---GVSGPSQDLLPPPNPYPLAQEHSQIYHC------TKRKDEECSSTEHPYKKPY 361
            |.:|...::   .|.||.|..|.|.: :.|.|.|:..:..      .........::||   ...
  Fly   566 LDNQQDDDDKLLDVVGPPQSPLLPLS-HSLQQMHAHQHSAALAAWFNHLAGAGAGASEH---AAA 626

Mouse   362 METSPSEEDTF----------YRSGYPQQQGLSTSYRTESAQRQACMYASSAPPSEPV-PSLEDI 415
            ...:.|.||..          .|.|.......|....|..|.|.    .|:..|.|.| .:....
  Fly   627 AAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRP----TSTGSPKEAVGAAAAAA 687

Mouse   416 SCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSGPLVPRLAGMANHGSPQLGEGMFQHQTSV 480
            :....|...||.|..::...|:      |.|.|     |:|.|.....:..|.||         :
  Fly   688 AAGLNPGGGSYPSPNISVGPPI------HPSPH-----LLPYLYPHGLYPPPHLG---------L 732

Mouse   481 AHQPVVRQCGPQTGLQSPGGLQP 503
            .|.|..      ....||.||.|
  Fly   733 LHNPAA------AAAMSPAGLNP 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx5XP_006530342.1 TBOX 72..260 CDD:238106 118/207 (57%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 6/19 (32%)
T-box 330..513 CDD:279278 114/184 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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