DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx4 and H15

DIOPT Version :9

Sequence 1:NP_035666.2 Gene:Tbx4 / 21387 MGIID:102556 Length:552 Species:Mus musculus
Sequence 2:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster


Alignment Length:549 Identity:162/549 - (29%)
Similarity:239/549 - (43%) Gaps:174/549 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse    24 ASNTSTTNAPEPALATPGLSGAALSS---------PPGQGAD----VAAAAAAAAEQT------- 68
            :||:..:|....:.:..|.|.||:.:         ||.|..:    ::...:.|.:.|       
  Fly   205 SSNSGNSNTNSKSSSQRGRSAAAVGAAATPSPPPPPPSQSPEELERLSPEESPAQQPTPKIVGSC 269

Mouse    69 ----IENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTG----MNPKTKYILLIDIV 125
                :..::..|..||||.||||.||||||||:||||||:.:|..:|    :.|..:|.:|:|:|
  Fly   270 NCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVV 334

Mouse   126 PADDHRYKFCDNK--WMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGH 188
            |.|..||::..::  |:|||||:|..|.|:|.|||.|.:.....:|:|||:|:|||||.:|..|.
  Fly   335 PLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQ 399

Mouse   189 IILNSMHKYQPRLHIVKADENNAF-GS----KNTAFCTHVFPETSFISVTSYQNHKITQLKIENN 248
            ::|||||:||||:|:|:.....:. ||    ::....|.|||||.|.:||:|||..||:|||::|
  Fly   400 VVLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSN 464

Mouse   249 PFAKGFRGSD---------------DSDLRVARLQSKEYPVISKSIMRQRLVSSQLSAKPDVSPL 298
            |||||||.|.               |..:|.|.|:....|::|:       ::.|.:....::.|
  Fly   465 PFAKGFRDSSRLSDFDRDPMDAFFFDQHMRTAPLRFFPDPLMSQ-------LTPQEADAASMALL 522

Mouse   299 HSAHQALQHYQYENGAHMQFAAAEPQD---LPLNTFPTQRDSSLFYHCLKRRDSARHLDLPCKRS 360
            ..|.|           |:|.....|..   ||                        ||   .:||
  Fly   523 EKARQ-----------HLQMFGRSPYTEMLLP------------------------HL---YQRS 549

Mouse   361 YLETPSSVGDDHYFRSPPP-----------YDQQ--MLSPSYCSEVTPREACMYSSSGPEIAGVS 412
            ....|           |||           :.||  .|:..:.:....:.|...:::|       
  Fly   550 AAPPP-----------PPPAPHLSAFQLGMWQQQWPQLTAGFLASANQQAALALAAAG------- 596

Mouse   413 AVDDLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPAHFTATTVMPRLPTIAAQSAQPPGNA- 476
             .:..|||.:      :|:|                 ||        |..||.:..||.|...| 
  Fly   597 -ANRTPPPSM------AVAP-----------------PA--------PATPTSSCGSASPDLRAR 629

Mouse   477 --------HFSVYNQLSQSQVRERGPSAS 497
                    .||.| |:.|.|.   .|.||
  Fly   630 PQLNHYPQRFSPY-QVPQHQA---SPPAS 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx4NP_035666.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 7/34 (21%)
TBOX 71..260 CDD:238106 99/214 (46%)
H15NP_608926.2 TBOX 276..475 CDD:238106 99/198 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831484
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.