DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx4 and bi

DIOPT Version :9

Sequence 1:NP_035666.2 Gene:Tbx4 / 21387 MGIID:102556 Length:552 Species:Mus musculus
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:399 Identity:158/399 - (39%)
Similarity:207/399 - (51%) Gaps:83/399 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 ESEEAFRAPGPALGEASNTSTTNAPEPALATPGL-SGAALSSPPGQ-GA---------------D 56
            :.::...||.|.....:......|..||...||| .|..|..||.. ||               |
  Fly   232 QQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPHAHHLGSAYTTAED 296

Mouse    57 VAAAAAAA----------------AEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSY 105
            |..|:|.|                .:..:::.||.|..|:||:|||:.||||:|||:||:|||..
  Fly   297 VVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQM 361

Mouse   106 KVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQL 170
            |.:|:|::.|.|||||:|||.|||:||||.:::|||||||:|.||.|:|:|||||.||..||:::
  Fly   362 KFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKV 426

Mouse   171 VSFQKLKLTNNHLDPFGHI---ILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISV 232
            |||.|||||||..|..|.:   |||||||||||.|:|:|  |:......:.|.|:||.||.||:|
  Fly   427 VSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRA--NDILKLPYSTFRTYVFKETEFIAV 489

Mouse   233 TSYQNHKITQLKIENNPFAKGF-----------------RGSDDSDLRVARLQSKEYPVISKSIM 280
            |:|||.|||||||:||||||||                 ||||...|....:.|...|       
  Fly   490 TAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAP------- 547

Mouse   281 RQRLVSSQLSAKPDVSPLHSAHQALQHYQYENGAHMQFAAAEPQD--LPLNTFPTQRDSSLFYHC 343
               |........|.:.|    |.||...|.::...:......||.  |||:            |.
  Fly   548 ---LHLGHAGRPPHLHP----HAALLDNQQDDDDKLLDVVGPPQSPLLPLS------------HS 593

Mouse   344 LKRRDSARH 352
            |::..:.:|
  Fly   594 LQQMHAHQH 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx4NP_035666.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 11/41 (27%)
TBOX 71..260 CDD:238106 120/208 (58%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 14/57 (25%)
T-box 330..513 CDD:279278 115/184 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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