DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx2 and Doc2

DIOPT Version :9

Sequence 1:NP_033350.2 Gene:Tbx2 / 21385 MGIID:98494 Length:711 Species:Mus musculus
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:553 Identity:175/553 - (31%)
Similarity:247/553 - (44%) Gaps:146/553 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse   106 KVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNS 170
            ::||:..:||.|||::||||:||||||||||..::.||||:.::.|.:|:::|...||||||..|
  Fly    57 EMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGS 121

Mouse   171 RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFH 235
            :|:.||.|:|:.|:|||:||||||||..|.|:|:.|:|:|||||..|..|..:|.||||||||.|
  Fly   122 QWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLH 186

Mouse   236 IVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLT 300
            ::|..|:.::|::..:.:||.||:|:||||||||:||:|||||||||||||:||..|        
  Fly   187 VIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSR-------- 243

Mouse   301 LPTLRLYEEHCKPERDGAESDASSCDPPPAREPPPSPSAAPSPLRLHRARAEEKPGAADSDPEPE 365
                      ||                  |:...||                            
  Fly   244 ----------CK------------------RKMSSSP---------------------------- 252

Mouse   366 RTGEERSAAP-LGRSPSRDASPARLTEPERSRERRSPERCSKEPTEGGGDGPFSLRSL-EKERPE 428
             |||::..:| |..|.|:..|                   ...||:|||:......|: :.:.|:
  Fly   253 -TGEDQDQSPSLSHSQSQSES-------------------DMSPTKGGGETAGGTSSIGDSDGPQ 297

Mouse   429 ARR-KDEGRKDVGEGKEPSLAPLVVQTDSASPLGAGHLPGLAFSS---HLHGQQFFGPLGAGQPL 489
            .:| :..|          |...|....|..|..||.   .||..|   |||......||.|....
  Fly   298 IKRLRSNG----------SACSLSSSLDDQSVPGAS---SLALGSPPPHLHSHSHPHPLQARSAS 349

Mouse   490 FLHPGQFAMGPGAFSAMGMGHLLASVAGGSGSSGGAGPGTAAGLDAGGLGPAASAASTAAPFPFH 554
            .:....|.....:.....:..|..:..|.....|||       :.|..:.|.|:           
  Fly   350 SVFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGA-------IQASPMYPPAA----------- 396

Mouse   555 LSQHMLASQGIPMPTFGGLFPYPYTYMAAAAAAASALPATSAAAAAAAAAGSLSRSPFLGSARPR 619
                ||.:         ||.|:|         ..:..|..|.|...:..:|:......:||....
  Fly   397 ----MLQA---------GLGPHP---------GLNLPPGVSGADLISDESGAEELELDVGSETST 439

Mouse   620 LRFSPYQIPVTIPPSTSLLTTGLAAEGSKGGNS 652
            |..|..:.|:..|.:.|   .|.:.....||.|
  Fly   440 LEQSTQEQPLEQPSTRS---KGFSISAILGGGS 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx2NP_033350.2 TBOX 104..289 CDD:238106 105/182 (58%)
TBX 305..382 CDD:204975 11/77 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..449 21/138 (15%)
Repression domain 1 (RD1). /evidence=ECO:0000250 518..602 15/83 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 640..687 4/13 (31%)
Doc2NP_648282.1 TBOX 55..242 CDD:238106 107/184 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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