DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbx1 and bi

DIOPT Version :9

Sequence 1:NP_001360867.1 Gene:Tbx1 / 21380 MGIID:98493 Length:529 Species:Mus musculus
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:620 Identity:200/620 - (32%)
Similarity:262/620 - (42%) Gaps:184/620 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse    21 AAEASEGTAHRGPRPSDRAKLRRLPGSPAGMHFSTVTRDMEAFAASSLSGLGSPSPGADPFGPRE 85
            ::.:|..:|.....||..         |...|.|..|.  .|...:..:||..|:|   |...::
  Fly   180 SSSSSNNSASAAAHPSHH---------PTAAHHSPSTG--AAAPPAGATGLPPPTP---PHHLQQ 230

Mouse    86 ---------PPPPRYDPC---AAVPGAPGPPPPRAYP-----FAP-APGA------AGSSAAESE 126
                     ||||.|.|.   ||:.|:|..|.|..||     |.| .|||      .||:...:|
  Fly   231 QQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPHAHHLGSAYTTAE 295

Mouse   127 GPGASRAAA-----VKAPVK----------KNPKVASVSVQLEMKALWDEFNQLGTEMIVTKAGR 176
            ....:.|.|     ...|::          .:|||.     ||.|.||::|::|||||::||:||
  Fly   296 DVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVT-----LEGKDLWEKFHKLGTEMVITKSGR 355

Mouse   177 RMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAK 241
            :|||..:.::.|:|..|.|:||:|.|..||  |||.||:|.|:|||||||..|.|::.|||||..
  Fly   356 QMFPQMKFRVSGLDAKAKYILLLDIVAADD--YRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTT 418

Mouse   242 GAQWMKQIVSFDKLKLTNNLLDDNGHI---ILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFV 303
            |.|||:::|||.|||||||:.|.:|.:   ||||||:||||||:|..:   |..|.....|:|:|
  Fly   419 GEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRAN---DILKLPYSTFRTYV 480

Mouse   304 FEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGALPLVSAFARSRNPVASPT 368
            |:||.|.|||||||.:||||||.:|||||||||..                   |..|....:..
  Fly   481 FKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTG-------------------AGKREKKQALM 526

Mouse   369 QPNGSDKDAAEARREFDRDSGPAALGDATHPPQLLA-------------RVLSPALPGPGGLVPL 420
            ...|||.|.... ........|..||.|..||.|..             ::|....|....|:||
  Fly   527 SNRGSDSDKLNP-THVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPL 590

Mouse   421 P---------------------------------------------------------------- 421
            .                                                                
  Fly   591 SHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDGSDSS 655

Mouse   422 ------GGSGGRHSPPHADLRLEAPGASEP-----LHHHPYKYPAAAYDHYLGAKSRPAPYPLPG 475
                  |.:||...|.......||.||:..     |:.....||:....  :|....|:|:.||.
  Fly   656 CSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNIS--VGPPIHPSPHLLPY 718

Mouse   476 LRGHGYHPHAHPHAHPHHHHHPAVNPAAAAAAAAA 510
            |..||.:|  .||....|      |||||||.:.|
  Fly   719 LYPHGLYP--PPHLGLLH------NPAAAAAMSPA 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbx1NP_001360867.1 T-box 151..336 CDD:366363 107/187 (57%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 15/57 (26%)
T-box 330..513 CDD:279278 108/192 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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