DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbr1 and Doc2

DIOPT Version :10

Sequence 1:NP_033348.2 Gene:Tbr1 / 21375 MGIID:107404 Length:681 Species:Mus musculus
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:481 Identity:161/481 - (33%)
Similarity:226/481 - (46%) Gaps:84/481 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse   195 TQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILA 259
            |.||:     ::.|.|..||.:||:..|||||||.||||||.:..::|||:..::|.:.::::..
  Fly    52 TLPGV-----EMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPI 111

Mouse   260 DPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQM 324
            ....::|.|.:|||.|.|:.. ...|:|:|||||.|||||..|.|.|.|:|||||  ..:|:|. 
  Fly   112 GDCRYKFSGSQWVPAGGAEPQ-SPQRMYLHPDSPATGAHWQAQPILFNKVKLTNN--TLDNSGH- 172

Mouse   325 VVLQSLHKYQPRLHVVEVNEDGTEDTSQ-P-GRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPF 387
            :||.|:|||||||||:.     |.|.:| | ...|.|.|.||:|:|||||||..||:||||:|||
  Fly   173 IVLASMHKYQPRLHVIR-----TADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPF 232

Mouse   388 AKGFRD--------NYDTIYTGCDMDRL-----TPSPNDSPRSQIVPGARYAMAGSFLQDQFVSN 439
            |||||:        ...:..||.|.|:.     :.|.::|..|....|...|...|.:.|.....
  Fly   233 AKGFRETGQSRCKRKMSSSPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQ 297

Mouse   440 YAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQ-RWFVTPANNRLDFAASAYDTA 503
            ..:.|.:..|.:......|:|||..:.|..       |:|.|. .....|...:...|:|.:  .
  Fly   298 IKRLRSNGSACSLSSSLDDQSVPGASSLAL-------GSPPPHLHSHSHPHPLQARSASSVF--M 353

Mouse   504 TDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGAKSGSVLPCWPNS 568
            ..|..|..:||..:        |....||     |:.        .|.:|.||...|  |.:|  
  Fly   354 QHFQQNMQSLLRPS--------LVDLACT-----YFG--------RPHEYGGAIQAS--PMYP-- 393

Mouse   569 AAAAARMAGANPYLGEEAEGLAAERSPLAPAAEDAKPKDL-SDSSWIETPSSIKSIDSSDSGIYE 632
             .||...||..|:.|..          |.|....|   || ||.|..|   .::....|::...|
  Fly   394 -PAAMLQAGLGPHPGLN----------LPPGVSGA---DLISDESGAE---ELELDVGSETSTLE 441

Mouse   633 QAKRRRISPADTPVSESSSPLKSEVL 658
            |:.:.:  |.:.|.:.|.....|.:|
  Fly   442 QSTQEQ--PLEQPSTRSKGFSISAIL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbr1NP_033348.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127
T-box_TBR1 203..393 CDD:410330 95/191 (50%)
T-box_assoc 418..679 CDD:465042 55/243 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..483 9/36 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..655 14/58 (24%)
Doc2NP_648282.1 T-box_Drosocross-like 56..238 CDD:410332 95/195 (49%)
Blue background indicates that the domain is not in the aligned region.

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