DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a6 and CG15279

DIOPT Version :9

Sequence 1:XP_030111163.1 Gene:Slc6a6 / 21366 MGIID:98488 Length:631 Species:Mus musculus
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:588 Identity:209/588 - (35%)
Similarity:331/588 - (56%) Gaps:40/588 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    35 SPGTR---PEDEADGKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIF 96
            ||..|   .:.||...|.:|..|...::|::|.....||||||||||:....||||||||||.|.
  Fly    31 SPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIV 95

Mouse    97 LFGSGLPVFFLEVIIGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFH 161
            ||..|.|:::||::|||::|.|.:..:: :||...|:|......|.:|:.||..::|....|...
  Fly    96 LFLIGKPIYYLEMVIGQFSSRGSVKVFD-LCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIE 159

Mouse   162 SFQKDLPWAHCNHSWNTPQCMEDTLRRNESHWVSLST-----ANFT-----SPVIE----FWERN 212
            ||:..|||:.|...|.. .|:...  .:.|:|..|.:     .|:|     ..||.    ::.:.
  Fly   160 SFRNPLPWSTCRAEWGI-HCINSA--PDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKE 221

Mouse   213 VL----SLSSGIDNPGSLKWDLALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVR 273
            ||    ::..||..|   .|:|.:.|.:.|...||.|.:||:|:||..||.|.||:.::.|||||
  Fly   222 VLHEKPNIEEGIGLP---NWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVR 283

Mouse   274 GLTLPGAGEGIKFYLYPDISRLGDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCML 338
            .:||||:.:||.:::.|...::.||:||..|.||.|:|.::|.|.:....|:||:.:|.:||..:
  Fly   284 AVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAI 348

Mouse   339 LGCLNSGTSFVSGFAIFSILGFMAQEQGV-DIADVAESGPGLAFIAYPKAVTMMP-LPTFWSILF 401
            :..|::.||.::||.||.|||.:|.|.|. ||..|.:.|.|||||:||.|:.... ||..:|:||
  Fly   349 VTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLF 413

Mouse   402 FIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAILCSISYLLGLTMVTEGGMYVFQ 466
            |:||.:||:.|........:|::.|.:|:|.:  ::..:.||:   :|:.:||..:|.||.|:..
  Fly   414 FLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQ--WQCSLLIAV---VSFFIGLMYITPGGQYMLT 473

Mouse   467 LFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPALCVGCFV 531
            |.|::.||.:.|: :...|.:.|.||||.|.|...||.|:|.:.|.:.:..|::|||.:.....:
  Fly   474 LVDFFGASMIALV-LGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILI 537

Mouse   532 FSLVKYVPLTYNKVYRYPDWAIGLGWGLALSSMLCIPLVIVILLCRTEG-PLRVRIKYLITPREP 595
            :....|.|||||.:. ||:|:..:||.:....:|.:|:.:::.:.|..| .|..:|:...||:: 
  Fly   538 YFYATYQPLTYNNIV-YPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKK- 600

Mouse   596 NRW 598
             .|
  Fly   601 -NW 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a6XP_030111163.1 SLC5-6-like_sbd 51..592 CDD:382020 200/561 (36%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 200/561 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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