DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc6a6 and ine

DIOPT Version :9

Sequence 1:XP_030111163.1 Gene:Slc6a6 / 21366 MGIID:98488 Length:631 Species:Mus musculus
Sequence 2:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster


Alignment Length:620 Identity:250/620 - (40%)
Similarity:361/620 - (58%) Gaps:50/620 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse    42 DEADGKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFF 106
            ||.....|:::.|::|:.|||:..|..|||||||||||:|||:|||.||:||.|.||...:|:.|
  Fly   328 DETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLF 392

Mouse   107 LEVIIGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFHSFQKDLPWAH 171
            :|:.:||||..|.|....::||||.|.|.||:|:..|::.||.||:.::.||.|.||:.::||..
  Fly   393 MELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWID 457

Mouse   172 CNHSWNTPQCMEDTLRRNESHWVSL-----STANFTS--PVIEFWERNVLSLSSGIDNPGSLKWD 229
            ||:.||||.|           ||..     ::|..||  |..||:|..||.:|.|::.||.::|:
  Fly   458 CNNRWNTPDC-----------WVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWE 511

Mouse   230 LALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPDISR 294
            |..||:..||:.:|..||.::|:.||.||||||||.::::|:||.:||.||.||::|:..|..|.
  Fly   512 LFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSE 576

Mouse   295 LGDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILG 359
            |.:..|||:|.:|.|.|..|..|:|.|..|||||..|..||.:.:..:|..||.:.|...||.||
  Fly   577 LKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLG 641

Mouse   360 FMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSL 424
            .:|.||..::.||...|||:.|:.||:|:..||....|:::||.|||.|||:|||..||..:||:
  Fly   642 NLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSI 706

Mouse   425 VDLYPSFLRK--GYRREIFIAILCSISYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECF 487
            .|.:|.::::  || .||.:..:|.||.|.|:..:.:||:|.|||.|:|||| |.::::||.:..
  Fly   707 QDGFPRWIKRHLGY-HEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMI 769

Mouse   488 VIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPALCVGCFVFSLVKYVPLTY-NKVYRYPDW 551
            .|||.||...|...::.|.|..|..:::..|.|:.|.|....:|.||:.|...|| |..|.||||
  Fly   770 AIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDW 834

Mouse   552 AIGLGWGLALSSMLCIPLVIVILLCRTEG-PLRVRIKYLITPR-----------------EPNRW 598
            |.|:||..|..|::|||...||...|:.| ....||:..:.|.                 |..::
  Fly   835 AYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQF 899

Mouse   599 AVEREGAT---PFHSRVTLM------NGALMKPSH 624
            .:.:|.||   |.:..:..:      |.....|||
  Fly   900 MLAQEMATVYKPTNPHLLNLGQKCGYNAMQASPSH 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a6XP_030111163.1 SLC5-6-like_sbd 51..592 CDD:382020 237/551 (43%)
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 237/551 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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