| Sequence 1: | NP_033345.2 | Gene: | Tarbp2 / 21357 | MGIID: | 103027 | Length: | 365 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
| Alignment Length: | 473 | Identity: | 98/473 - (20%) |
|---|---|---|---|
| Similarity: | 164/473 - (34%) | Gaps: | 154/473 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 18 SIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKA 82
Mouse 83 AKHKAAEVALKHLKGGSMLEPALEDSSSFSLLDSSPPEDTPVVAAEAAAPVPSAVLTRSPPM--- 144
Mouse 145 ----------EMQPPVSPQQSEC-------NPVGALQELVVQKGWRLPEYMVTQESG--PAHRKE 190
Mouse 191 FTMTCRVERFIEIGSGTSKKLAKRNAAAK------------------------------------ 219
Mouse 220 ---------------------MLLRVHTVPLDARD-------GNEAEPDDDHFSIGVSSRLDGLR 256
Mouse 257 NRGPGCTWDSLRNSVGEKILSLRSCSVGSLGALGSACCSVLSELS-------------------- 301
Mouse 302 -------------------EEQAFHVSYLDIEELSLSGLCQ-------CLVELSTQPATVCYGSA 340
Mouse 341 TTREAARGDAAHRALQYL 358 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Tarbp2 | NP_033345.2 | Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 22..105 | 28/82 (34%) | |
| DSRM_TARBP2_rpt1 | 27..98 | CDD:380719 | 26/70 (37%) | ||
| Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 151..233 | 27/147 (18%) | |||
| DSRM_TARBP2_rpt2 | 158..224 | CDD:380681 | 24/124 (19%) | ||
| Sufficient for interaction with DICER1. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 227..365 | 36/185 (19%) | |||
| Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 286..365 | 25/119 (21%) | |||
| DSRM_TARBP2_rpt3 | 291..362 | CDD:380722 | 23/114 (20%) | ||
| stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | |
| DSRM | <529..555 | CDD:294045 | |||
| DSRM | 579..644 | CDD:214634 | 24/64 (38%) | ||
| DSRM | 712..780 | CDD:214634 | 22/67 (33%) | ||
| Staufen_C | <953..1020 | CDD:293091 | 20/64 (31%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||