| Sequence 1: | NP_033345.2 | Gene: | Tarbp2 / 21357 | MGIID: | 103027 | Length: | 365 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_609646.1 | Gene: | loqs / 34751 | FlyBaseID: | FBgn0032515 | Length: | 465 | Species: | Drosophila melanogaster |
| Alignment Length: | 401 | Identity: | 133/401 - (33%) |
|---|---|---|---|
| Similarity: | 193/401 - (48%) | Gaps: | 84/401 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 7 GSGTTTGCG-----LPSIEQM----------LAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQ 56
Mouse 57 AHQPNFTFRVTVGDT----SCTGQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSLLDSS 117
Mouse 118 PPEDTPVVAAEAAAPVPSAVLTRSPPMEMQPPVSPQQSECNPVGALQELVVQKGWRLPEYMVTQE 182
Mouse 183 SGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHTVPLDARDGN---------EAE 238
Mouse 239 P--DDDHF----SIGV-------SSRLDGLRNRGPGCTWDSLRNSVGEKILSL-RSC----SVGS 285
Mouse 286 LGALGSACCSVLSELSEEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCYGSATTREAARGDA 350
Mouse 351 AHRALQYLRIM 361 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Tarbp2 | NP_033345.2 | Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 22..105 | 37/96 (39%) | |
| DSRM_TARBP2_rpt1 | 27..98 | CDD:380719 | 33/74 (45%) | ||
| Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 151..233 | 31/81 (38%) | |||
| DSRM_TARBP2_rpt2 | 158..224 | CDD:380681 | 28/65 (43%) | ||
| Sufficient for interaction with DICER1. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 227..365 | 51/162 (31%) | |||
| Sufficient for interaction with PRKRA. /evidence=ECO:0000255|HAMAP-Rule:MF_03034 | 286..365 | 35/76 (46%) | |||
| DSRM_TARBP2_rpt3 | 291..362 | CDD:380722 | 33/71 (46%) | ||
| loqs | NP_609646.1 | DSRM | 136..204 | CDD:214634 | 30/67 (45%) |
| DSRM | 250..316 | CDD:238007 | 28/65 (43%) | ||
| DSRM | 394..460 | CDD:214634 | 32/73 (44%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167848509 | |
| Domainoid | 1 | 1.000 | 57 | 1.000 | Domainoid score | I10834 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 169 | 1.000 | Inparanoid score | I4137 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG45942 | |
| OrthoDB | 1 | 1.010 | - | - | D1093169at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003036 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44200 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR46205 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X2027 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.870 | |||||