DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EWSR1 and ewsr1

DIOPT Version :9

Sequence 1:XP_011528297.1 Gene:EWSR1 / 2130 HGNCID:3508 Length:670 Species:Homo sapiens
Sequence 2:NP_989309.1 Gene:ewsr1 / 394931 XenbaseID:XB-GENE-6258537 Length:674 Species:Xenopus tropicalis


Alignment Length:705 Identity:496/705 - (70%)
Similarity:555/705 - (78%) Gaps:66/705 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTATYGQT 65
            |||||||||||..|||.|||||||||||||||.|..|||||||||.||||.|||||||||:|||:
 Frog     1 MASTDYSTYSQTGAQQSYSAYTAQPTQGYAQTAQATYGQQSYGTYAQPTDASYTQAQTTASYGQS 65

Human    66 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQ 130
            ||||||||||||||.|.||||||||:||||:..||:||||.|||||:|||.||||:|||||:|||
 Frog    66 AYATSYGQPPTGYTAPAAPQAYSQPMQGYGSTGYDSTTATTTTTQATYAAPSAYGSQPAYPSYGQ 130

Human   131 QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTS 195
            |||.||..|||||:||.:||||..||..|.|||:||.||:|||||||.|||||.|:|||||||||
 Frog   131 QPATTASARPQDGSKPADTSQPPPSTASYAQPSMGYSQSSYSYPQVPASYPMQQVSAPPSYPPTS 195

Human   196 YSSTQPTSYDQS------------------SYSQQNTYGQPSSYGQQSSYGQQSSY------GQQ 236
            |||:|.:||:||                  |||||::|||||||||||.|||||||      .|.
 Frog   196 YSSSQTSSYEQSSYSQPSSYTQQSGYGQQASYSQQSSYGQPSSYGQQSGYGQQSSYQAPPQQQQP 260

Human   237 PPTSYPPQTGSY-SQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQE-SGGFSGPGENRSMSGPD 299
            |||||||.:.|| ||.|.||.|||||||||||:|.||.||...|||| ..|||..||||...|.|
 Frog   261 PPTSYPPPSSSYSSQPPGQYGQQSSSYGQQSSYRPDHSSSKSPYGQEPHQGFSSSGENRGSGGSD 325

Human   300 NRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGP------PVDPDED 358
            :|.||||.|:||||||||| |.||||||.|:|.||:||||.:|:||||||||      |:|.:::
 Frog   326 SRSRGRGMFERGGMSRGGR-GSRGGMGSGGDRAGFSKPGGLLDDGPDLDLGPPMPLPLPLDLEDE 389

Human   359 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 423
            .::|.||||||||:||::::.||||.||.||:|||||:|::::::||||||||||.|||:||||:
 Frog   390 LESSTIYVQGLNDNVTVEEIVDFFKHCGDVKINKRTGEPLVNLFMDKETGKPKGDGTVSFEDPPS 454

Human   424 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRM 488
            ||.|:|..||||..|:|:||||||||..:.|||||...|:.||.|||||         ||||||:
 Frog   455 AKTAIELCDGKDLNGNKVKVSLARKKSLLGSMRGGSLLRDNRGQPPPLR---------GGPMGRL 510

Human   489 GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGDFCCDVIVCRGCGNQNFAWRTE 553
            |||||:||||.||||||.||:|. .|||||||||||||||             ||||||||||||
 Frog   511 GGRGGERGGFMPRGPRGPRGSPV-SGNVQHRAGDWQCPNP-------------GCGNQNFAWRTE 561

Human   554 CNQCKAPKPEGFLP-PPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGR 617
            |||||||||:|  | |||||.||:|||||| |||||| ||||||.| ||||||||||||||| ||
 Frog   562 CNQCKAPKPDG--PFPPFPPQGGERGRGGP-GMRGGR-GLMDRGVP-GMFRGGRGGDRGGFR-GR 620

Human   618 GMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG--RGGPGKMDKGEHRQERRDRPY 670
            |||| ||||||||||.|||||||||:|||.||  ||||.||||.|||||||:|||
 Frog   621 GMDR-GFGGGRRGGPPGPPGPLMEQLGGRIGGGRRGGPSKMDKSEHRQERRERPY 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EWSR1XP_011528297.1 RRM <351..>459 CDD:223796 67/113 (59%)
RRM_EWS 362..445 CDD:240977 54/82 (66%)
zf-RanBP 519..561 CDD:279035 28/41 (68%)
RanBP2-type Zn finger 523..557 CDD:275375 20/33 (61%)
ewsr1NP_989309.1 PRK14949 <22..>142 CDD:237863 97/119 (82%)
RRM_SF 393..476 CDD:388407 54/82 (66%)
zf-RanBP 541..567 CDD:366216 25/38 (66%)
RanBP2-type Zn finger 544..565 CDD:275375 20/33 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 532 1.000 Domainoid score I3215
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 989 1.000 Inparanoid score I3162
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43140
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 1 1.000 - - FOG0007232
OrthoInspector 1 1.000 - - oto156944
Panther 1 1.100 - - LDO PTHR23238
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4499
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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