DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EWSR1 and ewsr1b

DIOPT Version :9

Sequence 1:XP_011528297.1 Gene:EWSR1 / 2130 HGNCID:3508 Length:670 Species:Homo sapiens
Sequence 2:XP_005165164.2 Gene:ewsr1b / 322880 ZFINID:ZDB-GENE-030131-1600 Length:579 Species:Danio rerio


Alignment Length:700 Identity:349/700 - (49%)
Similarity:416/700 - (59%) Gaps:151/700 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAS-TDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPT---DVSYTQAQTTA- 60
            ||| |:||:|:||.|||.|.:|||.|.|.|.||.||.|.||.|.:|.||.   :.:|:||..:| 
Zfish     1 MASVTNYSSYNQAGAQQSYGSYTAPPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSAG 65

Human    61 TYGQTAYATSYGQ-------PPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSA 118
            .|.|..|.::|||       .|..|.|| .|.||:||.|.||..:|..:|| ....||||.:|..
Zfish    66 AYAQQQYGSTYGQAAATAAAAPAAYGTP-QPGAYTQPAQSYGASSYTGSTA-APAAQASYGSQPG 128

Human   119 YGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 183
            |.|||||..|.|||||:|                                               
Zfish   129 YSTQPAYSGYSQQPAASA----------------------------------------------- 146

Human   184 PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG--QQSSYG---------QQP 237
                     |.|||::...:|:||:|||...|.||....||..||  |||:||         |.|
Zfish   147 ---------PQSYSASSQPAYNQSAYSQPAGYSQPGYQAQQPGYGQQQQSAYGQGQPPQQHQQGP 202

Human   238 PTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSG--PGENRSMSGPDN 300
            |.:|||| ||.|.|.:||.|||:   .|:.::|:..:|   |.|  ||.||  ||..|   |...
Zfish   203 PAAYPPQ-GSSSYAQTQYGQQSA---PQNDYQQNPYNS---YSQ--GGVSGGYPGSQR---GGYQ 255

Human   301 RGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIY 365
            .| ||.|:||||..  |||.||||||.||:|||||||||||..|.|.|:|.|  .::||:||.||
Zfish   256 DG-GRDGYDRGGPR--GRGMGRGGMGIAGDRGGFNKPGGPMRGGMDRDMGHP--GEQDSENSTIY 315

Human   366 VQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEW 430
            :.||.::.||.::|:|||..|.:::|:|..||.|:||.||::||||||||:|||:|..||||||.
Zfish   316 ITGLTENATLPEMAEFFKHTGAIRINRRLNQPAINIYTDKDSGKPKGDATLSYEEPAFAKAAVEH 380

Human   431 FDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDR 495
            ||||:|||.:||||:||:||.:..||||:|.|                ||||...|.|.||||:|
Zfish   381 FDGKEFQGRRLKVSMARRKPMIGGMRGGMPMR----------------GGPGMDRGGMMGRGGER 429

Human   496 GGFPPR-GPRGSRGNPSGG---GNVQHRAGDWQCPNPSIGDFCCDVIVCRGCGNQNFAWRTECNQ 556
            |||||| ||||..| .:||   ||||.|||||:|||             .|||||||:||.||||
Zfish   430 GGFPPRGGPRGGMG-WNGGPQPGNVQKRAGDWECPN-------------AGCGNQNFSWRMECNQ 480

Human   557 CKAPKPEGF-LPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMD 620
            ||||||||. ..||| .|||:|||   ||||||||  ||||||||| |||.|||||||||..|||
Zfish   481 CKAPKPEGLGTSPPF-SPGGERGR---GGMRGGRG--MDRGGPGGM-RGGWGGDRGGFRGRGGMD 538

Human   621 RGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY 670
            ||||.||.||||.      |::  ||| |.|.||||:..:||||||:|||
Zfish   539 RGGFRGGSRGGPP------MDR--GRR-GMGPPGKMEMRDHRQERRERPY 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EWSR1XP_011528297.1 RRM <351..>459 CDD:223796 61/107 (57%)
RRM_EWS 362..445 CDD:240977 49/82 (60%)
zf-RanBP 519..561 CDD:279035 24/41 (59%)
RanBP2-type Zn finger 523..557 CDD:275375 16/33 (48%)
ewsr1bXP_005165164.2 RRM <306..>397 CDD:223796 53/90 (59%)
RRM_SF 312..395 CDD:302621 49/82 (60%)
zf-RanBP 456..486 CDD:279035 25/42 (60%)
RanBP2-type Zn finger 460..481 CDD:275375 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194328888
Domainoid 1 1.000 128 1.000 Domainoid score I21016
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG43140
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 1 1.000 - - FOG0007232
OrthoInspector 1 1.000 - - oto45324
orthoMCL 1 0.900 - - OOG6_114329
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4499
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1515.250

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