DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EWSR1 and fust-1

DIOPT Version :9

Sequence 1:XP_011528297.1 Gene:EWSR1 / 2130 HGNCID:3508 Length:670 Species:Homo sapiens
Sequence 2:NP_495483.1 Gene:fust-1 / 174175 WormBaseID:WBGene00016173 Length:448 Species:Caenorhabditis elegans


Alignment Length:554 Identity:182/554 - (32%)
Similarity:218/554 - (39%) Gaps:194/554 - (35%)


- Green bases have known domain annotations that are detailed below.


Human   203 SYDQS--------------SYSQQNTYGQPSSYGQQSSYGQQSSYG-----QQPPTSY---PPQT 245
            :||||              :|.||....||.....|..|. .::||     |||...|   ||..
 Worm     3 AYDQSQPDYSTPEGQQAYWAYYQQQQQQQPGGQPDQDPYA-AAAYGGHDQAQQPQNPYAPPPPGA 66

Human   246 GSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPD-NRGRGRGGFD 309
            ..|.|.....|..|..|||                ...||..|.|.:|...|.| .||..|||:|
 Worm    67 DPYGQGSGGQSGGSDPYGQ----------------SRGGGRGGFGGSRGGGGYDGGRGGSRGGYD 115

Human   310 RG----GMSRGGRGGGRGGM------GSAGERGGFNKPGGP-------MDEGPDLDLGPPV---- 353
            .|    |..||||||||||.      ||..:.|..::.|||       .|.||..| |||.    
 Worm   116 GGRGGYGGDRGGRGGGRGGYDGERRGGSRWDDGNSDRQGGPPGGRGGYQDRGPRRD-GPPSGGGY 179

Human   354 --------DPDEDSD-----NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDK 405
                    :.:..||     ...::|||::.:.....:||.|..||.:..|.|  .|.|.||.|:
 Worm   180 GGGGAASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKNDR--GPRIKIYTDR 242

Human   406 ETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG--SKLKVSLARKKPPMNSMRGGLPPREGRGMP 468
            .||:|||:..:::.|...|:.|:..::|:.|.|  |.:.:|||:.:......|||          
 Worm   243 NTGEPKGECMITFVDASAAQQAITMYNGQPFPGGSSPMSISLAKFRADAGGERGG---------- 297

Human   469 PPLRGGPGG-PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGD 532
               |||.|| .||.|||||..||.||||||:            .|||.                 
 Worm   298 ---RGGRGGFGGGRGGPMGGRGGFGGDRGGY------------GGGGG----------------- 330

Human   533 FCCDVIVCRGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGG 597
                    ||                               |.|.||||.||.|||     ||||
 Worm   331 --------RG-------------------------------GFDGGRGGGGGFRGG-----DRGG 351

Human   598 PGGMFRGG-RGGDRGGFRGG-RGMDRGGFGGGRRGGPGGPPGPL--------MEQMGG-----RR 647
            ..|..||| ||||||||||| ||.|||||.|||  |.||....:        .||.|.     ||
 Worm   352 FRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGR--GVGGGNANMEQRKNDWPCEQCGNSNFAFRR 414

Human   648 -----------GGRGGPGKMDKGEHRQERRDRPY 670
                       ||.||.|...:|......|.|||
 Worm   415 ECNQCQAPRPDGGSGGGGGERRGGPPGGDRYRPY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EWSR1XP_011528297.1 RRM <351..>459 CDD:223796 36/126 (29%)
RRM_EWS 362..445 CDD:240977 27/84 (32%)
zf-RanBP 519..561 CDD:279035 2/41 (5%)
RanBP2-type Zn finger 523..557 CDD:275375 2/33 (6%)
fust-1NP_495483.1 RRM <202..>290 CDD:223796 30/89 (34%)
RRM_FET 203..284 CDD:240726 27/82 (33%)
ZnF_RBZ 398..421 CDD:197784 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161461975
Domainoid 1 1.000 57 1.000 Domainoid score I7900
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I2628
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007232
OrthoInspector 1 1.000 - - otm14993
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.890

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