Sequence 1: | XP_005247270.1 | Gene: | MECOM / 2122 | HGNCID: | 3498 | Length: | 1240 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_594670.1 | Gene: | sfc2 / 2542887 | PomBaseID: | SPAC144.09c | Length: | 374 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 256 | Identity: | 74/256 - (28%) |
---|---|---|---|
Similarity: | 108/256 - (42%) | Gaps: | 38/256 - (14%) |
- Green bases have known domain annotations that are detailed below.
Human 206 ERQYRCE--DCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESENDLQ---EIH----- 260
Human 261 ---TIQECKECDQVFPDLQSLEKHMLS-HTEEREYKC--DQCPKAFNWKSNLIRH-QMSHDSGKH 318
Human 319 YEC--ENC-AKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSV----KP 376
Human 377 FIC--EVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKH--RRFCEGKNH 433 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MECOM | XP_005247270.1 | PR-SET_PRDM3 | 47..204 | CDD:380991 | |
C2H2 Zn finger | 211..260 | CDD:275368 | 12/53 (23%) | ||
C2H2 Zn finger | 265..285 | CDD:275368 | 7/20 (35%) | ||
zf-H2C2_2 | 277..301 | CDD:372612 | 7/26 (27%) | ||
zf-C2H2 | 291..313 | CDD:333835 | 7/24 (29%) | ||
C2H2 Zn finger | 293..313 | CDD:275368 | 6/22 (27%) | ||
C2H2 Zn finger | 321..343 | CDD:275368 | 10/24 (42%) | ||
zf-H2C2_2 | 334..360 | CDD:372612 | 11/25 (44%) | ||
zf-C2H2 | 349..371 | CDD:333835 | 7/21 (33%) | ||
C2H2 Zn finger | 351..371 | CDD:275368 | 7/19 (37%) | ||
zf-C2H2 | 377..399 | CDD:333835 | 9/23 (39%) | ||
C2H2 Zn finger | 379..399 | CDD:275368 | 9/21 (43%) | ||
C2H2 Zn finger | 408..426 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2 | 922..944 | CDD:333835 | |||
C2H2 Zn finger | 924..944 | CDD:275368 | |||
zf-H2C2_2 | 936..960 | CDD:372612 | |||
C2H2 Zn finger | 952..973 | CDD:275368 | |||
zf-H2C2_2 | 964..990 | CDD:372612 | |||
C2H2 Zn finger | 981..1001 | CDD:275368 | |||
sfc2 | NP_594670.1 | COG5048 | 1..374 | CDD:227381 | 74/256 (29%) |
C2H2 Zn finger | 28..47 | CDD:275368 | |||
C2H2 Zn finger | 55..77 | CDD:275368 | 6/23 (26%) | ||
C2H2 Zn finger | 85..107 | CDD:275368 | 2/21 (10%) | ||
C2H2 Zn finger | 115..138 | CDD:275368 | 8/25 (32%) | ||
C2H2 Zn finger | 146..165 | CDD:275368 | 5/18 (28%) | ||
C2H2 Zn finger | 206..226 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 238..261 | CDD:275368 | 9/22 (41%) | ||
C2H2 Zn finger | 269..286 | CDD:275368 | 5/16 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24393 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |