DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETFDH and etfdh

DIOPT Version :9

Sequence 1:NP_004444.2 Gene:ETFDH / 2110 HGNCID:3483 Length:617 Species:Homo sapiens
Sequence 2:NP_001005631.1 Gene:etfdh / 448088 XenbaseID:XB-GENE-972267 Length:616 Species:Xenopus tropicalis


Alignment Length:617 Identity:513/617 - (83%)
Similarity:567/617 - (91%) Gaps:2/617 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     2 LVPLAKLSCLAYQCFHALKIKKNYLP-LCATRWSSTSTVPRITTHYTIYPRDKDKRWEGVNMERF 65
            ::||.|.:..|:.||......||.|| .|..||:| |:||||||||||.|||:||||||:|||||
 Frog     1 MLPLCKHTLHAHHCFAYFTALKNCLPSSCLKRWAS-SSVPRITTHYTICPRDQDKRWEGMNMERF 64

Human    66 AEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPD 130
            ||||||||||.||||||||:||||||...:|::|||||||.|||||||||||||:|.|.:|||||
 Frog    65 AEEADVVIVGGGPAGLSAAIRLKQLAAECDKELRVCLVEKGAQIGAHTLSGACLEPRALEELFPD 129

Human   131 WKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVY 195
            |||:|||||||||||:|||||:|:||||||||||||||||||||||||.|||:||||||||||:|
 Frog   130 WKERGAPLNTPVTEDKFGILTKKHRIPVPILPGLPMNNHGNYIVRLGHFVSWLGEQAEALGVEIY 194

Human   196 PGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKF 260
            |||||:|||||:||||||||||||||.|||:||:|||||||||||||||.||||||||||||.||
 Frog   195 PGYAASEVLFHEDGSVKGIATNDVGIHKDGSPKSTFERGLELHAKVTIFGEGCHGHLAKQLYNKF 259

Human   261 DLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVV 325
            :||.|||||||.||||||||||||.||||.|:|||||||||||||||||||||||||||||||||
 Frog   260 NLRQNCEPQTYAIGLKELWVIDEKKWKPGCVEHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVV 324

Human   326 GLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPG 390
            |||||||:::||||.||||||||:.||||||.||||||||||||||||:||||||||:|:|||||
 Frog   325 GLDYQNPFINPFRELQRWKHHPSVVPTLEGGNRIAYGARALNEGGFQSLPKLTFPGGILVGCSPG 389

Human   391 FMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIR 455
            |||||||||||||||||:||||:||.:||.|::||||.||.|.|||::||.||:|||||||||||
 Frog   390 FMNVPKIKGTHTAMKSGMLAAENIFKKLTDESIQSKTQGLDVPEYEESLKKSWIWKELYSVRNIR 454

Human   456 PSCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLS 520
            |||||.||:||||:|||||||:|||.|||||||||.|..:|||||||.|||||||||::||||||
 Frog   455 PSCHGPLGLYGGMVYTGIFYWMLRGKEPWTLKHKGLDSNQLKPAKDCVPIEYPKPDGKLSFDLLS 519

Human   521 SVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQN 585
            |||||||||:|||||||||:|||:|||:||:|||||||||||||||||||:|.|:|.||||||||
 Frog   520 SVALSGTNHDHDQPAHLTLKDDSLPVNKNLAIYDGPEQRFCPAGVYEFVPLESGEGSRLQINAQN 584

Human   586 CVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
            ||||||||||||||||||||||||||||||||
 Frog   585 CVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETFDHNP_004444.2 FixC 67..529 CDD:223717 392/461 (85%)
NADB_Rossmann 68..>217 CDD:304358 126/148 (85%)
ETF_QO 512..615 CDD:282972 91/102 (89%)
etfdhNP_001005631.1 FixC 66..528 CDD:223717 392/461 (85%)
ETF_QO 511..614 CDD:368327 91/102 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 728 1.000 Domainoid score I1529
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3275
Inparanoid 1 1.050 1104 1.000 Inparanoid score I2611
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG54178
OrthoDB 1 1.010 - - D117499at7742
OrthoFinder 1 1.000 - - FOG0003019
OrthoInspector 1 1.000 - - oto154662
Panther 1 1.100 - - LDO PTHR10617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3366
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.080

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