DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETFDH and let-721

DIOPT Version :9

Sequence 1:NP_004444.2 Gene:ETFDH / 2110 HGNCID:3483 Length:617 Species:Homo sapiens
Sequence 2:NP_001379625.1 Gene:let-721 / 175916 WormBaseID:WBGene00002855 Length:597 Species:Caenorhabditis elegans


Alignment Length:577 Identity:364/577 - (63%)
Similarity:449/577 - (77%) Gaps:6/577 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    43 TTHYTIYPRDKDKRWEGVNMERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAA 107
            |||||:..|..|.||:.|::.|.::..||||||.||:|||||:||:|||...:|::|||:||||:
 Worm    25 TTHYTVKDRSTDPRWKDVDLARESDVYDVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKAS 89

Human   108 QIGAHTLSGACLDPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNY 172
            .||.||||||.::..|..||.|:|||.|||:...||.:...||||..|||||:|||:|:.|||||
 Worm    90 VIGGHTLSGAVIETRALDELIPNWKELGAPVYQQVTSESIAILTESGRIPVPVLPGVPLANHGNY 154

Human   173 IVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLEL 237
            |||||.:|.|:||||||.||||:|..||:|||:::|||||||||:||||.||||||..|.||:|.
 Worm   155 IVRLGKVVQWLGEQAEAAGVEVWPEIAASEVLYNEDGSVKGIATSDVGIGKDGAPKDGFARGMEF 219

Human   238 HAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRH 302
            |||.|||||||.|||:||:..|||||.:.  .||||||||||.||....:||.|:||:||||:..
 Worm   220 HAKCTIFAEGCRGHLSKQVLDKFDLRTHA--MTYGIGLKELWEIDPAKHRPGYVEHTMGWPLNVD 282

Human   303 TYGGSFLYHL-NEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARAL 366
            .||||||||: ::|:|||::|.||.|||.||.|:|::|||::|.||||...|||||||.||||||
 Worm   283 QYGGSFLYHIEDQGQPLVSVGFVVALDYANPNLNPYKEFQKYKTHPSISKQLEGGKRIGYGARAL 347

Human   367 NEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGLH 431
            |||||||||||.||||.|:|||.||:||.|:||||.|||||::||||||..:..:....:||  .
 Worm   348 NEGGFQSIPKLHFPGGCLVGCSAGFLNVAKLKGTHNAMKSGMVAAESIFEDIQQKGEDVQTI--D 410

Human   432 VTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERL 496
            ...|:.|:::::|.|||.:.||||||.:..||..||:||:||||...||:|||||.|...|.|:|
 Worm   411 PATYDKNIRDTYVVKELKATRNIRPSFNTSLGYIGGLIYSGIFYVFGRGIEPWTLGHGKKDNEKL 475

Human   497 KPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFC 561
            .|.||...|:||||||:::||||:||:|:||||..||||||||::|.:|::.||::|.|||.|||
 Worm   476 IPVKDAKEIDYPKPDGKLTFDLLTSVSLTGTNHTEDQPAHLTLKNDQVPLDVNLAVYGGPEARFC 540

Human   562 PAGVYEFVPVEQGDG-FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
            |||||||||.|..:. .|||||||||:||||||||||.||||||.|||||||.|.||
 Worm   541 PAGVYEFVPSEADESKKRLQINAQNCIHCKTCDIKDPQQNINWVTPEGGGGPKYEGM 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETFDHNP_004444.2 FixC 67..529 CDD:223717 287/462 (62%)
NADB_Rossmann 68..>217 CDD:304358 95/148 (64%)
ETF_QO 512..615 CDD:282972 73/103 (71%)
let-721NP_001379625.1 FixC 48..508 CDD:223717 287/463 (62%)
ETF_QO 491..594 CDD:398727 73/102 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161470805
Domainoid 1 1.000 494 1.000 Domainoid score I195
eggNOG 1 0.900 - - E1_COG2440
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3275
Inparanoid 1 1.050 752 1.000 Inparanoid score I330
Isobase 1 0.950 - 0 Normalized mean entropy S422
OMA 1 1.010 - - QHG54178
OrthoDB 1 1.010 - - D180808at33208
OrthoFinder 1 1.000 - - FOG0003019
OrthoInspector 1 1.000 - - oto21118
orthoMCL 1 0.900 - - OOG6_101719
Panther 1 1.100 - - LDO PTHR10617
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R420
SonicParanoid 1 1.000 - - X3366
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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