Sequence 1: | NP_001080.2 | Gene: | ABCA3 / 21 | HGNCID: | 33 | Length: | 1704 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
Alignment Length: | 857 | Identity: | 182/857 - (21%) |
---|---|---|---|
Similarity: | 306/857 - (35%) | Gaps: | 262/857 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 523 PEDLVAGIKIKHLSKVFRVGNKDRA--AVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPP 585
Human 586 TSGRAYISGYEI--------SQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCP 642
Human 643 EEVKQMLHIIGLEDKWNSRSRF---LSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIW 704
Human 705 DLLQR--QKSDRTIVLTTHFMDEADLLGDRIAIMAKGEL-------------QCCG-SSLFLK-- 751
Human 752 ----QK----------------------------------YGAGYHM--------------TLVK 764
Human 765 EPHCNPEDISQLVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAK-LEKKQKELGIASFGAS 828
Human 829 ITTMEEVF--LRVGKLVDSSMDIQAIQLPALQYQHE---RRASDWAVDSNLCGAMDPSDG----- 883
Human 884 IGALIEEERTAVKLNTGLALHCQQFWAMF--LKKAAYSWREWKMVAAQVLVPLTCVTLALLAINY 946
Human 947 SSELFDDPML-RLTLGEYG--RTVVPFSVP-----GTSQLGQQLSEHLKDA--------LQAEGQ 995
Human 996 EPREVLGDLEEFLIFRASVEGGGFNERCLVAASFRDVGERTVVNAL--FNNQAYHSPATALAVVD 1058
Human 1059 NLL---------------------FKLLCGPHASIVVSNFPQPRSALQAAKDQFNEGRKGFDIAL 1102
Human 1103 NLLFAMAFLASTFSILAVSERAVQAKHVQFVSGVHVASFWLSALLWDL---------ISFLIPSL 1158
Human 1159 LLLVVFKAFDVRAFTRDGHMADTLLLLLLYGWAIIPLMYLMNFFFLGAATAYTRLTIFNILSGIA 1223
Human 1224 TFLMVTIMRIPA 1235 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA3 | NP_001080.2 | ABC2_membrane_3 | <271..469 | CDD:289468 | |
CcmA | 530..839 | CDD:224054 | 92/394 (23%) | ||
ABC_subfamily_A | 530..751 | CDD:213230 | 69/249 (28%) | ||
ABC2_membrane_3 | 923..1261 | CDD:289468 | 73/361 (20%) | ||
ABC_subfamily_A | 1381..1602 | CDD:213230 | |||
drrA | 1397..1692 | CDD:130256 | |||
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 67/230 (29%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 66/225 (29%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | 9/52 (17%) | ||
ABC2_membrane_3 | 429..801 | CDD:289468 | 91/469 (19%) | ||
ABC2_membrane | 601..769 | CDD:279410 | 35/202 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |