DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment T and bi

DIOPT Version :9

Sequence 1:NP_033335.1 Gene:T / 20997 MGIID:98472 Length:436 Species:Mus musculus
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:455 Identity:145/455 - (31%)
Similarity:204/455 - (44%) Gaps:102/455 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSSPGTESAGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVT 65
            :.|..|.:....|...|.|.|......|:|...:.|....:.:|.||..:||.:|.:|..||::|
  Fly   287 LGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVIT 351

Mouse    66 KNGRRMFPVLKVNVSGLDPNAMYSFLLDFVTADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSP 130
            |:||:|||.:|..|||||..|.|..|||.|.||::|:|:.|..|:..||.:|:.|..:|||||||
  Fly   352 KSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSP 416

Mouse   131 NFGAHWMKAPVSFSKVKLTNKLNGG----GQIMLNSLHKYEPRIHIVRVGG----PQRMITSHCF 187
            ..|..||:..|||.|:||||.::..    ...:|||:|||:||.|:||...    |.....::.|
  Fly   417 TTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVF 481

Mouse   188 PETQFIAVTAYQNEEITALKIKYNPFAKAFLD--AKERNDHKDVMEEPGDCQQPGYSQWGWLVPG 250
            .||:||||||||||:||.|||..|||||.|.|  |.:|...:.:|...|                
  Fly   482 KETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRG---------------- 530

Mouse   251 AGTLCPPASSHPQFGGSLSLPSTH-GCERYPALRNHRSSPYPSPYAHRNSSPTYADNSSACLSML 314
                          ..|..|..|| ...|.|....|...|   |:.|.:::  ..||        
  Fly   531 --------------SDSDKLNPTHVSSSRAPLHLGHAGRP---PHLHPHAA--LLDN-------- 568

Mouse   315 QSHDNWSSLGV--PGHTSMLPVSHN--------------------ASPPTGSSQYPSLWSVS--- 354
            |..|:...|.|  |..:.:||:||:                    |....|:|::.:..:.:   
  Fly   569 QQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASA 633

Mouse   355 ----------------NGTITPGSQTAGVSNGLGAQFFR----GSPAHYTPLTHTVSAATSSSSG 399
                            :|:.:..|::.|.|.| ||  ||    |||..........:||..:..|
  Fly   634 EDALRRRLQADADVERDGSDSSCSESVGGSTG-GA--FRPTSTGSPKEAVGAAAAAAAAGLNPGG 695

Mouse   400  399
              Fly   696  695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNP_033335.1 T-box_TBXT 41..219 CDD:410328 92/185 (50%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 8/30 (27%)
T-box 330..513 CDD:279278 92/182 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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