DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf4 and Surf4

DIOPT Version :9

Sequence 1:NP_035642.1 Gene:Surf4 / 20932 MGIID:98445 Length:269 Species:Mus musculus
Sequence 2:NP_477222.1 Gene:Surf4 / 41864 FlyBaseID:FBgn0019925 Length:270 Species:Drosophila melanogaster


Alignment Length:266 Identity:160/266 - (60%)
Similarity:210/266 - (78%) Gaps:0/266 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWSCGYLLASS 68
            |:.:...||.|:|.::..|..||.|||||||:||.|||:||:.||:|||:|:|.:|.||..||:.
  Fly     5 NEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSWGCGKFLATV 69

Mouse    69 FVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAE 133
            ||.:||||||.||.:|::|..|..|...||.|:.|||:|||||||.:||:||.||.|.|||:|||
  Fly    70 FVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLRNFALIGALLLVLAE 134

Mouse   134 SRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIIQNIVGTALMILVAIG 198
            :|.||:|:|||||:|.|:.||.:|||.||:||..||:||:.|:.|.:.:||:|:|:.||:||.:|
  Fly   135 ARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQVIQDIIGSILMVLVVLG 199

Mouse   199 FKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMD 263
            :||||:||.||..|..:|:|.||:||||.|||:.||||||||||:|||||||::|:|||||||||
  Fly   200 YKTKLSALILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVSMD 264

Mouse   264 EKKKEW 269
            |.||:|
  Fly   265 EHKKKW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf4NP_035642.1 SURF4 4..269 CDD:111019 159/264 (60%)
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:O15260 266..269 2/2 (100%)
Surf4NP_477222.1 SURF4 5..270 CDD:111019 159/264 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833868
Domainoid 1 1.000 337 1.000 Domainoid score I1107
eggNOG 1 0.900 - - E1_COG2259
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6052
Inparanoid 1 1.050 338 1.000 Inparanoid score I2366
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51950
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003735
OrthoInspector 1 1.000 - - oto93147
orthoMCL 1 0.900 - - OOG6_104535
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1415
SonicParanoid 1 1.000 - - X2591
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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