DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stxbp4 and Patj

DIOPT Version :9

Sequence 1:NP_035635.1 Gene:Stxbp4 / 20913 MGIID:1342296 Length:557 Species:Mus musculus
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:564 Identity:111/564 - (19%)
Similarity:202/564 - (35%) Gaps:149/564 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    25 VTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSI 89
            |...||||..|:|.  ||.|  |.:..::|||...|||||:.||.::.|...::..:..|:..::
  Fly   153 VNDGTGLGFGIIGA--RNSG--VIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAV 213

Mouse    90 I----TRAKLRSESPWEIAFIRQKSYCGHPGNICCPSPQVSEDCGPQTSTFTLLSSPSE------ 144
            :    |..:|....|.|.:               .|:||.:.:.|.......:|..|:|      
  Fly   214 LRQSGTHVRLVVARPVEQS---------------VPTPQYALEPGTAVVPTRVLVDPAELERYLI 263

Mouse   145 -TLLPK------TSSTPQ--TQDSTF----------------------PSCKAIQTKPEHD---- 174
             |..|:      |:||||  |:|..|                      |..:.:|.:.:.|    
  Fly   264 STGYPEIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGL 328

Mouse   175 ----------KTEHSPITSLDNSPADTSNADIAPAWTDDDSGPQGKISLNPS-VRLKAEKLEMAL 228
                      |.|.|.|.....||.  |.||::           |:|.:|.. :.:..:.|:...
  Fly   329 GITIAGYVCEKEELSGIFVKSVSPG--SAADLS-----------GRIRVNDRIIEVDGQSLQGYS 380

Mouse   229 NYLGIQPTKEQREALREQVQADSKGTVSFGDFVQVARSLFCLQLDEVNVGVHEIPS--------- 284
            |:..::..|:..:.:..:::...:|.    .|.|:.:::  ...|::.......||         
  Fly   381 NHQAVELLKKSGQVVNLRLERYLRGP----KFEQLQQAI--AANDKLPSSAPGTPSRAPMPTPVA 439

Mouse   285 -ILDSQLLPCDSLEADEVGKLRQERNAALE-------ERNVLKEKLLESEKHRKQLIEELQNVKQ 341
             ...:...|..|:..:    |.:|...|.|       ....:....|.|....|||:....::..
  Fly   440 TTSSATTTPSRSITRE----LEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDG 500

Mouse   342 EAKAVAEETRALRSRIHLAEAAQRQAHGMEMDYE-------EVIR----LLEAEVSELKAQLADY 395
            ..|.:..|...|..:.....:.....|....|.|       |:||    ::.::|..:.||:..:
  Fly   501 STKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKF 565

Mouse   396 S----------DQNKESVQDLRK----RVTVLDCQLRKSEMAR---KAFKASTERLLGF-----I 438
            :          ..:.|..:::|.    |..:.|..:..:.:.|   :..:.:.|||||.     :
  Fly   566 AVGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVV 630

Mouse   439 EAIQEVLLDSSAPLSTLSERRAVLASQTSLPLLARNGRS-FPAT 481
            ..::|:.||.............:..|..:|..|:.|..: .|||
  Fly   631 AILKELPLDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPAT 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stxbp4NP_035635.1 PDZ_signaling 21..94 CDD:238492 24/72 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..214 26/122 (21%)
Luteo_P1-P2 <189..393 CDD:285641 38/232 (16%)
WW 502..531 CDD:278809
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 24/75 (32%)
PDZ_signaling 318..400 CDD:238492 17/94 (18%)
PDZ_signaling 557..643 CDD:238492 15/85 (18%)
PDZ_signaling 726..807 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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