Sequence 1: | XP_006510998.1 | Gene: | Myo5c / 208943 | MGIID: | 2442485 | Length: | 1749 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 2022 | Identity: | 523/2022 - (25%) |
---|---|---|---|
Similarity: | 849/2022 - (41%) | Gaps: | 480/2022 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 7 YAQYNRVWIPDPEEVWKSAEIAKDYRAGDRVLRLLLEDG------MELEYPVDPGSLPPLRNPDI 65
Mouse 66 LVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNM 130
Mouse 131 GDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKS-------SSNA 188
Mouse 189 HVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSEN 253
Mouse 254 ERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMG-GNTVIEGVNDRADMVETQKTFTLLGFKK 317
Mouse 318 DFQMDVFKILAAILHLGNVQVTTVGNERSSVSEDDSHLKVFCELLGLETSKVAQWLCNRKIVTSS 382
Mouse 383 ETVVKPMTRPQAINARDALAKKIYAHLFDFIVEQINQALHFSGKQHTFIGVLDIYGFETFDVNSF 447
Mouse 448 EQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDF-YDNQPVIDLIEAKMGILELLDEEC 511
Mouse 512 LLPHGTDENWLQKLYNNFVNKNSLFEKPR-----MSNSSFIIQHFADKVEYQCEGFLEKNRDTVY 571
Mouse 572 DMLVEILRASKFHLCAAFFQESPVPS-----------SPFGAMITVKSAKQVIKPNTKHFRTTVG 625
Mouse 626 NKFRSSLYLLMETLNATTPHYVRCIKPNDEKMPFEFDSKRIVQQLRACGVLETIRISAQSYPSRW 690
Mouse 691 TYLEFYSRYGILMTQQELSLSDKKEVCKVVLHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDK 755
Mouse 756 LRQDCIMIQKHVRGWLQRRKF--LRERQAAL-TIQRYFR-------------------------- 791
Mouse 792 -------------------GQQTVRK---AITATALKEAWAAI--------ILQKYCRGYLVRNL 826
Mouse 827 YQLIRVATITIQAHTRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYR- 890
Mouse 891 -------------------------VQRLQKKLEDQNRENHGLVEKLTSLAALRVGDLEKVQ--- 927
Mouse 928 -----KLEAELEKAATHRHSYEEKGRRYRDTVEERLSKLQKHNAELELQRERAEQMLQEKSEELK 987
Mouse 988 EKMDKLTRQLFDDVQKEEQQRLVLEKGFELKTQAYEKQIESLREEIKA-------LKDERSQLHH 1045
Mouse 1046 QLEE--------GQVTSDRL---KGEVARLSKQAK----------------------TISEFEKE 1077
Mouse 1078 IELLQAQKIDVEK-----------------HVQSQK-------REMRERMSEVTKQLLES----Y 1114
Mouse 1115 DIEDVRSRLSVEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQK---DCYEKEIEGLNFKVVHL 1176
Mouse 1177 SQEINHLQKLFREETDINESIRHEVTRLTSE-----NMMIPDFKQQISELERQKQDLESRLKEQA 1236
Mouse 1237 EKIEG------KLEEPFSHLNRIREEERMQGRAPHPFLRAVEAQ-------------------SE 1276
Mouse 1277 MHPEGKE---------RLVGAIHEPHE-------------------------------AIKFPKK 1301
Mouse 1302 QPEAE--------EEVESILQQEAS---RLSLEKRDLEEELDMKDRMIRRLQDQVKTLTKTTEKA 1355
Mouse 1356 NHVHLPSGSREYLGMLEYKKEDEGKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDA 1420
Mouse 1421 NMLKSLMNSAINGIKHVVKEHFEDLEMLSFWLSNTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLN 1485
Mouse 1486 NFDLTEYRQIL--SDVAIRIYHQFIIVMENNLQPIIVPGMLEYESLQ--GISGLKPTGFRKRSSS 1546
Mouse 1547 IDDTDAYTMTSILQQLSYFYSTMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLL------------ 1599
Mouse 1600 LRKDMCSCRKGMQIRC-----------------------------------------NISFLEEW 1623
Mouse 1624 LKDKNVQSSLAKETLEPLSQAAWLLQVK----KTTDSDAKEIAQCCTSLSAVQIIKILNSYTPID 1684
Mouse 1685 DFEKRVN 1691 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5c | XP_006510998.1 | MYSc_Myo5 | 81..741 | CDD:276831 | 261/684 (38%) |
DUF3584 | <767..>1043 | CDD:378817 | 79/375 (21%) | ||
SMC_prok_A | <922..1276 | CDD:274009 | 97/462 (21%) | ||
ERM | 1220..>1354 | CDD:366293 | 46/209 (22%) | ||
Myo5c_CBD | 1376..1743 | CDD:271260 | 66/377 (18%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 11/39 (28%) |
MYSc | 81..777 | CDD:214580 | 269/724 (37%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 261/684 (38%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 223/1165 (19%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 69/394 (18%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 29/130 (22%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 14/97 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |