Sequence 1: | NP_001103376.1 | Gene: | Stau1 / 20853 | MGIID: | 1338864 | Length: | 495 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609646.1 | Gene: | loqs / 34751 | FlyBaseID: | FBgn0032515 | Length: | 465 | Species: | Drosophila melanogaster |
Alignment Length: | 410 | Identity: | 98/410 - (23%) |
---|---|---|---|
Similarity: | 155/410 - (37%) | Gaps: | 117/410 - (28%) |
- Green bases have known domain annotations that are detailed below.
Mouse 95 KSEISQVFEIALKRNLPVNFESFLLTQVARESGPPHMKNFVTRVSVGE----FVGEGEGKSKKIS 155
Mouse 156 KKNAARAVLEQL--RRLPPLPAVERVKPRIKKKSQPTCK-LQTAPDYGQGM-------------- 203
Mouse 204 -NPISRLAQIQQAKKEKEPEYMLLTERGLPRRREFVMQVKVGHHTAEGVGTNKKVAKRNAAENML 267
Mouse 268 EILGFKVPQAQPAKPALKSEEKTPVKKPGDGRKVTFFEPSPGDENGTSNKDEEF-------RMPY 325
Mouse 326 LSHQQLPAGILPMVPEVAQAVGVSQGHHT-KDFTRAAPNPAKATVTAMIARELLYGGTSPTAETI 389
Mouse 390 LKSNISSGHVPHGPRTRPSEQLYYLSRAQGFQVEYKDFPK---NNKNECVSLINCSSQPPLVSHG 451
Mouse 452 IGKDVESCHDMAALNILKLL 471 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Stau1 | NP_001103376.1 | DSRM | 98..167 | CDD:214634 | 23/72 (32%) |
DSRM | 204..270 | CDD:238007 | 23/65 (35%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 278..318 | 6/39 (15%) | |||
Staufen_C | 366..475 | CDD:293091 | 24/109 (22%) | ||
loqs | NP_609646.1 | DSRM | 136..204 | CDD:214634 | 23/73 (32%) |
DSRM | 250..316 | CDD:238007 | 23/65 (35%) | ||
DSRM | 394..460 | CDD:214634 | 18/68 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167848497 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |