DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfp143 and CG10348

DIOPT Version :9

Sequence 1:XP_006507593.2 Gene:Zfp143 / 20841 MGIID:1277969 Length:653 Species:Mus musculus
Sequence 2:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster


Alignment Length:376 Identity:77/376 - (20%)
Similarity:109/376 - (28%) Gaps:162/376 - (43%)


- Green bases have known domain annotations that are detailed below.


Mouse   233 LQGHATR-------------VTPKSQQSGEKAFRCKYDGCGKLYTTAHHLKVHERSHTGDRPYQC 284
            ||.:.||             .||...|..:..:.||:                            
  Fly   279 LQDYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKF---------------------------- 315

Mouse   285 EHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRT-HTGERPFKCPIEG 348
                |||.|.....|..|.||||||:||:|.  .|.:||..|.:||:|:|. |..||||||.|  
  Fly   316 ----CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKERPFKCEI-- 372

Mouse   349 CGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRF 413
                                          |.|.|...||...|::.|..:...:..:.|..:|.
  Fly   373 ------------------------------CERCFGQQTNLDRHLKKHESDAVSLSALSGVSERM 407

Mouse   414 TEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQEAFFE-------- 470
                                  ||            .:|...|.||      |::||        
  Fly   408 ----------------------HC------------IRRFCENPTE------ESYFEEIRSFMGK 432

Mouse   471 --------PPPGQGDDVLKGSQITYVTGVDGEDIVSTQVATVTQSGLSQQVTLISQDGTQHV-NI 526
                    ....|.|...:..|             ||..:..:....|:.....|.:...|. ..
  Fly   433 VTQQQQQQQQQQQHDQQQQQHQ-------------STATSASSSCSSSRDTPTSSHEEADHAPAT 484

Mouse   527 SQADMQAIGNTITMVTQDGTPI------------TVPTHDAVISSAGTHSV 565
            |.||..|..::.....:|..||            ...|.|:.:::..|.|:
  Fly   485 STADTAAPSSSRDQEEEDSQPIMELKRTLTSKLFPTTTADSAMTTPQTTSI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfp143XP_006507593.2 SFP1 <222..307 CDD:227516 17/86 (20%)
C2H2 Zn finger 254..276 CDD:275368 2/21 (10%)
COG5048 <266..439 CDD:227381 42/173 (24%)
C2H2 Zn finger 284..306 CDD:275368 7/21 (33%)
C2H2 Zn finger 314..336 CDD:275368 9/22 (41%)
C2H2 Zn finger 344..366 CDD:275368 2/21 (10%)
C2H2 Zn finger 374..396 CDD:275368 6/21 (29%)
C2H2 Zn finger 404..426 CDD:275368 2/21 (10%)
C2H2 Zn finger 434..453 CDD:275368 2/18 (11%)
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 28/96 (29%)
zf-C2H2 311..333 CDD:278523 9/53 (17%)
C2H2 Zn finger 313..333 CDD:275368 9/51 (18%)
zf-H2C2_2 325..349 CDD:290200 13/25 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 14/55 (25%)
zf-C2H2 368..390 CDD:278523 10/53 (19%)
C2H2 Zn finger 370..390 CDD:275368 8/51 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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