Protein Alignment Srebf2 and Usf

DIOPT Version :9

• Sequence 1: NP_150087.1
• Gene: Srebf2 / 20788
• MGIID: 107585
• Length: 1130
• Species: Mus musculus
• Sequence 2: NP_572167.3
• Gene: Usf / 31384
• FlyBaseID: FBgn0029711
• Length: 437
• Species: Drosophila melanogaster
• Alignment Length: 475
• Identity: 97/475 - (20%)
• Similarity: 148/475 - (31%)
• Gaps: 196/475 - (41%)

Mouse    84 SFSQVPLSTFSPSAASPQAPALQVKVSPTPPRATPVLQPRPQPQPQPPAQLQQQTVMITPTFSTA 148
            |.|....|| |||:         |.:|...|.|.|.|                .|:       |.
  Fly    16 STSNTNTST-SPSS---------VNISNANPTAGPGL----------------MTI-------TN 47

Mouse   149 PQTRIIQQPLIYQNAATSFQVLQPQVQSLVTSPQVQPVTIQQQVQ---TV---------QAQRVL 201
            ..|..:.:.|::.:.|...|.|      ::||....|:...|..|   |:         |....:
  Fly    48 HHTADLSEALVHSSFANGQQSL------ILTSDTGNPLMNSQGAQIFLTICGDENSDDSQEYYTI 106

Mouse   202 TQTANGTL--QTLAPATVQTVAAPQVQQVPVLVQPQIIK-TDSL--------------------- 242
            .|.....|  .:|.|:.:|   .|...|:|...:..::| |.||
  Fly   107 KQEPGCDLDIHSLLPSNLQ---LPNNLQLPTGCEIYLVKETGSLMGEPPTKAAIKLELDTLSEKP 168

Mouse   243 ----VLTTLKTDGSPVMAAVQNPAL-------TALTAPIQTAALQVPTLVGSNG---------TI 287
                |.|:..|..:.:.|...||.:       |:.|:...|.::    |.||:|         ..
  Fly   169 LLPSVTTSSSTQSAVITAQTVNPPIPGNINTTTSTTSTTTTTSV----LYGSHGNGHGHGHAHAQ 229

Mouse   288 LTTMPVMMGQEKVPIKQVPGGVKQLDPPKEGERRTTHNIIEKRYRSSINDKIIELKDLV------ 346
            ..:.|...|       |.|....:....::.:||.|||.:|:|.|..||..|.:||:::
  Fly   230 ARSQPESAG-------QTPSSKLEAYKKRDDKRRATHNEVERRRRDKINSWIFKLKEMLPSLSSS 287

Mouse   347 ---------------MGTDAKMH-----------------KSGVLRKAIDYIKYLQ--------- 370
                           ..|:...|                 ||.:|.||.:|||.:|
  Fly   288 SSFSEASTSPSTSGSTSTNGSSHSKGNASSSSGRAPPNDSKSQILIKACEYIKSMQGEIDTLRDC 352

Mouse   371 --------QVNHKLRQE-----------------------NMVLKLANQK--NKLLKGID----- 397
                    ..|..||:|                       |:.|...|..  :.|.:|||
  Fly   353 LRETDSLRASNQALREELDRLKRQQQLQERFHTAGGRSTFNVTLNSLNSSATSDLFEGIDTTPNL 417

Mouse   398 --LGSLVDSDVDLKIDDFNQ 415
              :.||......|.|.||::
  Fly   418 AAVSSLGFGKRGLLISDFDE 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srebf2	NP_150087.1	Transcriptional activation (acidic). /evidence=ECO:0000250|UniProtKB:P36956	1..50
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	53..133		13/48 (27%)
		Interaction with LMNA. /evidence=ECO:0000269|PubMed:11929849	226..480		64/319 (20%)
		HLH	320..370	CDD:278439	23/87 (26%)
		Leucine-zipper	369..390		8/62 (13%)
Usf	NP_572167.3	HLH	255..343	CDD:278439	23/87 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1708
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940