Sequence 1: | NP_766036.2 | Gene: | Rnf43 / 207742 | MGIID: | 2442609 | Length: | 784 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_596376.1 | Gene: | hrd1 / 2539900 | PomBaseID: | SPBC17D11.02c | Length: | 677 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 458 | Identity: | 94/458 - (20%) |
---|---|---|---|
Similarity: | 155/458 - (33%) | Gaps: | 136/458 - (29%) |
- Green bases have known domain annotations that are detailed below.
Mouse 168 DAAKLMEFVYKNRKA-YVWIELKEPPAGANYDVWILLTVVGTVFVIILASVLRIRCRPHHSRPDP 231
Mouse 232 LQQRTARAISQLAT------------RRYQAGCRRARAEWPDSGSS--CSSTPVCAICLEE---- 278
Mouse 279 ------------FSEGQEL--RVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGDSFSQAPAAS 329
Mouse 330 PSYQEPGRRLHLIRQHPGHAHYHLPSAYLLGPSRTSVARTPRPRPF--LPSQEPSMGSRHQR--- 389
Mouse 390 --LPRTSHLRAPEEQQHLAVSPHPYAQGW------GLNRLRCTSQ-----HPAACPVALRRARPH 441
Mouse 442 ESSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTDVSLQGIHG---------SSSTF 497
Mouse 498 RSSLSSDFDPLVYCSPEGDLQGKGIQPSVTSRPRSL------DSVVPRGETQVSSHIHYHRHRHH 556
Mouse 557 HYK 559 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rnf43 | NP_766036.2 | zf-RING_2 | 270..312 | CDD:290367 | 15/59 (25%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 364..407 | 10/49 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 459..478 | 4/18 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 516..671 | 11/50 (22%) | |||
hrd1 | NP_596376.1 | HRD1 | 1..514 | CDD:227568 | 80/390 (21%) |
zf-RING_2 | 291..351 | CDD:290367 | 15/59 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |