DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpinb6a and nec

DIOPT Version :9

Sequence 1:NP_001157589.1 Gene:Serpinb6a / 20719 MGIID:103123 Length:399 Species:Mus musculus
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:384 Identity:109/384 - (28%)
Similarity:186/384 - (48%) Gaps:38/384 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse    32 FALNLLK-ILGEDSSKNVFLSPMSISSALAMVFMGAKGTTASQMAQALALDKCSGNGGGDVHQGF 95
            |:..|.| |:...|.:||..||.|:.:.||:::..:.|.|..::.:|....|    ....|.|.|
  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSK----NAMAVAQDF 170

Mouse    96 QSLLT-EVNKTGTQYLLRTA---NRLFG--DKTCDLLASFKDSCLKFYEAELEELDFQGATEESR 154
            :|::. :.:..|....|.|.   ||..|  :.:.|..|.|      ::.|..|.:|.|.| :::.
  Fly   171 ESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKF------YFSAGTEAVDMQNA-KDTA 228

Mouse   155 QHINTWVAKKTEDKIKEVLSPGTVNSDTSLVLVNAIYFKGNWEKQFNKEHTREMPFKVSKNEEKP 219
            ..||.||...|.:||:::::|..|:..|..:||||:||:|.||.:|....|....|:.:......
  Fly   229 AKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISK 293

Mouse   220 VQMMFKKSTFKMTYIGEIFTKILLLPYVSSELNMIIMLPDEHVELSTVEKEVTYEKFIEWTRL-D 283
            |.|||....:.:..:.|:....|.|.|..|..:|:|:||:|...|..:.::::..:| :..|: .
  Fly   294 VAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEF-DLNRVAH 357

Mouse   284 KMDEEEVEVFLPKFKLEENYNMNDALYKLGMTDAFGGRADFSGMSSKQGLFLSKVVHKAFVEVNE 348
            ::..:.|.|.||||:.|...:|.:.|..||:...|...:..:.:.. |.:.:||::.||::.|.|
  Fly   358 RLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-QPVRVSKILQKAYINVGE 421

Mouse   349 EGTEAAAATAGMMTVRCMRFTP--------RFCADHPFLFFIHHVKTNGILFCGRFSSP 399
            .||||:||:..       :|.|        .|.|:.||:|.:.  ....:||.|....|
  Fly   422 AGTEASAASYA-------KFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVEYP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpinb6aNP_001157589.1 SERPIN 25..399 CDD:294093 108/382 (28%)
necNP_524851.1 SERPIN 108..468 CDD:238101 108/379 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

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