DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpina3m and Spn42Dd

DIOPT Version :9

Sequence 1:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:383 Identity:122/383 - (31%)
Similarity:192/383 - (50%) Gaps:28/383 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    45 LTLASINTDFAFSLYKKMALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETS 109
            |.:.|:....:..:|:.::..:.::|:|.||:||...|::|.:||:|:|.:|:...|... :|..
  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71

Mouse   110 EADIHQGFGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEA 174
            || :...:|.||..|...|:...:.:.|.:::.....:...::...|..:::||.:........|
  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135

Mouse   175 TKLINDYVSNQTQGMIKKLI--SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSV 237
            .:.||.:|.:||.|.||.:|  ..:......:|||.|||||:|:..|||..|..|.|.:...:||
  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200

Mouse   238 KVPMM-KMKFLTTRHFRDEELSCSVLELKY-TGNASALFILPDQGRMQQVEA-SLQPETLRKWWK 299
            .|.|| :|......:|||  |...|:||.| ..|.|....||     ::||. |...|.:..:.:
  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALEEKIVGFAR 258

Mouse   300 SLKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKD-LSVSQVVHKAVLDV 363
            .|..::: .|.||||.|.....||:.|.:|||:|:|:.::||||:...|. ..||||.|||.|:|
  Fly   259 PLVAKEV-YLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEV 322

Mouse   364 AETGTEAAAATGFIF----GFRSRRLQTMTVQFNRPFLMVISHTGVQTTLFMAKVTNP 417
            .|.|.|||.||....    ||      :..:..:.||..||  ....|..|..:|.:|
  Fly   323 NEEGAEAAGATSVAVTNRAGF------STFLMADHPFAFVI--RDANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpina3mNP_033279.2 SERPIN 56..417 CDD:214513 119/370 (32%)
RCL 367..392 8/28 (29%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 118/370 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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