DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpina3n and Spn42Dd

DIOPT Version :10

Sequence 1:NP_033278.2 Gene:Serpina3n / 20716 MGIID:105045 Length:418 Species:Mus musculus
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:380 Identity:117/380 - (30%)
Similarity:184/380 - (48%) Gaps:22/380 - (5%)


- Green bases have known domain annotations that are detailed below.


Mouse    45 LTLASINTDFAFSLYKELVLKNPDKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETS 109
            |.:.|:....:..:|:.|...:.::|:|.||:||...|:::.:||:|:|.:|:...|... :|..
  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71

Mouse   110 EADIHQGFGHLLQRLNQPKDQVQISTGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQA 174
            || :...:|.||..|...::...:...:.:::..:..:...:....|..:::||.:........|
  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135

Mouse   175 KKLINDYVRKQTQGMIKELV--SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPV 237
            .:.||.:|..||.|.||.::  ..:......:|||.||||.:|:..|||..|..|.|.....:.|
  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200

Mouse   238 IVPMMS-MEDLTTPYFRDEELFCTVVELKY-TGNASAMFILPDQGKMQQVEASLQPETLRKWKNS 300
            .|.||: |......||||  |...|:||.| ..|.|....||     ::||.....|  .|....
  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE--EKIVGF 256

Mouse   301 LKPRMIDE--LHLPKFSISTDYSLEDVLSKLGIREVFSTQADLSAITGTKD-LRVSQVVHKAVLD 362
            .:|.:..|  |.||||.|.....|::.|.||||||:|:.::|||.:...|. .:||||.|||.|:
  Fly   257 ARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLE 321

Mouse   363 VAETGTEAAAATGVKFVPMSAKLYPLTVYFNRPFLIMIFDTETEIAPFIAKIANP 417
            |.|.|.|||.||.|.....:.  :...:..:.||..:|.|..|  ..|..::.:|
  Fly   322 VNEEGAEAAGATSVAVTNRAG--FSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpina3nNP_033278.2 serpinA3_A1AC 37..418 CDD:381019 117/380 (31%)
RCL 367..392 7/24 (29%)
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 115/374 (31%)

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