DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpinb6b and Spn42Dd

DIOPT Version :9

Sequence 1:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:363 Identity:128/363 - (35%)
Similarity:205/363 - (56%) Gaps:28/363 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    23 SSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSL---DKCSGKGGRDVHQGFQSLLTETNKT 84
            :::|::.||:|:.:.|:||||||:|:||.::..||.|   ||      ..|...:.:||.:....
  Fly    30 TNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDK------EAVAARYGALLNDLQGQ 88

Mouse    85 GTQYVLRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQSRQHINAWVAKKTEDKIT 149
            ....:|:.|||::....:.:..::..:.|:.:::|.|.:..... ..:.:.||.||..:|..||.
  Fly    89 EEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNG-PVAAERINQWVLDQTSGKIK 152

Mouse   150 ELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVKPVQMMFQKSTFKMTYVE 214
            .::..||:.|:...:|||||||||.||.:|:...|:...|.||.:...|||||.|..||:..|..
  Fly   153 GMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFR 217

Mouse   215 EISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLDKMEEEEVEVFLPKFKLE 279
            ::...::.|||:.:.|:|.|.||.|...||.:|     :|.:.:.|  .:..:||.:.|||||:|
  Fly   218 DLDAQVIELPYLNSNLSMTIFLPREVEGLSALE-----EKIVGFAR--PLVAKEVYLKLPKFKIE 275

Mouse   280 ENYDMKDVLCRLGMTDAFEEGMADFSGI-ASKEGLFLSKVIHKSFVEVNEEGTEAAAATAANI-- 341
            ...::|:.|.:||:.:.|.: .:|.||: |.|.|..:|:|.||:|:||||||.|||.||:..:  
  Fly   276 FRDELKETLEKLGIRELFTD-KSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAVTN 339

Mouse   342 --GFRCMVPYFCANHPFLFFIQHSRTSGIVFCGRFSSP 377
              ||.   .:..|:|||.|.|:.:.|  |.|.||..||
  Fly   340 RAGFS---TFLMADHPFAFVIRDANT--IYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 126/361 (35%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 125/358 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.730

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