DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpinb6b and nec

DIOPT Version :9

Sequence 1:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:394 Identity:115/394 - (29%)
Similarity:191/394 - (48%) Gaps:43/394 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PLLEANATFALNLLK-TLGEDSSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDKCSGKG 66
            |:......|:..|.| .:...|.:||:|||.||.:.||:::..:.|.|..::.:|...    .|.
  Fly   102 PVFSYMDRFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEF----SKN 162

Mouse    67 GRDVHQGFQSLLT-ETNKTGTQYVLRTA---NRLFG--EKTFDILASFKDSCRKFYEAEMEELDF 125
            ...|.|.|:|::. :.:..|....|.|.   ||..|  ..::|..|.|      ::.|..|.:|.
  Fly   163 AMAVAQDFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKF------YFSAGTEAVDM 221

Mouse   126 KGATEQSRQHINAWVAKKTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFN 190
            :.|.:.:.: |||||...|.:||.:|::...|:..|..:||||:||:|.||.:|...||....|.
  Fly   222 QNAKDTAAK-INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQ 285

Mouse   191 VTKDVVKPVQMMFQKSTFKMTYVEEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKF 255
            .|...:..|.|||....:.:..:.|:....|.|.|..:..:|:|:||:|...|..:.::::..:|
  Fly   286 HTNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEF 350

Mouse   256 IEWTRL-DKMEEEEVEVFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSGIAS--KEGLFLSK 317
             :..|: .::..:.|.|.||||:.|...||.:.|..||:...|...    |.:..  .:.:.:||
  Fly   351 -DLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPN----SQVTKLMDQPVRVSK 410

Mouse   318 VIHKSFVEVNEEGTEAAAATAANIGFRCMVPY--------FCANHPFLFFIQHSRT-SGIVFCGR 373
            ::.|:::.|.|.||||:||:.|.     .||.        |.||.||:|.:   || :.::|.|.
  Fly   411 ILQKAYINVGEAGTEASAASYAK-----FVPLSLPPKPTEFVANRPFVFAV---RTPASVLFIGH 467

Mouse   374 FSSP 377
            ...|
  Fly   468 VEYP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 114/392 (29%)
necNP_524851.1 SERPIN 108..468 CDD:238101 113/383 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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