DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Serpinb9b and Spn42Dd

DIOPT Version :9

Sequence 1:NP_035582.1 Gene:Serpinb9b / 20706 MGIID:894668 Length:377 Species:Mus musculus
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:366 Identity:125/366 - (34%)
Similarity:203/366 - (55%) Gaps:17/366 - (4%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LLKMLCQSNPSKNVCFSPVSISSALAMVLLGAKEQTAVQISQALGLKKE--KGIHQGFLKLLRKL 77
            :.::|.:|:.::|:..|||||.:.|:||.:||:..||.::..||||..|  :.:...:..||..|
  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDL 85

Mouse    78 NKPDRKYSLIVANRLFADKTCEVLQTFKESCFRFYDSEMEQVNFFKAAVESRQCINTWVSKQTEG 142
            ...:....|.:|||::.:....:.|.:..:....:.||.|.::.....|.:.: ||.||..||.|
  Fly    86 QGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAER-INQWVLDQTSG 149

Mouse   143 KIPELLADDSVNFQTRLVLVNALYFKGMWACQFCKESTREMPFYINKDEKRPVQMMCQTDTFMFA 207
            ||..::...|:....:.:||||:||||.|..:|....||...|.:..::..|||||.|..||...
  Fly   150 KIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRAN 214

Mouse   208 FVDELPARLLIMPYEGMELSLMVLLPEKGVDLSKVENDLTFEKLIAWTKPDIMWSTEVKVFLPKF 272
            :..:|.|:::.:||....||:.:.||.:...||.:|     ||::.:.:|  :.:.||.:.||||
  Fly   215 YFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALE-----EKIVGFARP--LVAKEVYLKLPKF 272

Mouse   273 KLQEDYEMKSVLQCLGIVDVFEKEKADLSAMSPERN-LCLSKFIHKSVVEVNEEGTEAAAASSAE 336
            |::...|:|..|:.|||.::| .:|:|||.:..::: ..:|:..||:.:||||||.|||.|:|  
  Fly   273 KIEFRDELKETLEKLGIRELF-TDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATS-- 334

Mouse   337 GIIPLCLGGGPSWFCADHPFLFFIRHNQTNSILFCGRFSSP 377
             :......|..::..|||||.|.||  ..|:|.|.||..||
  Fly   335 -VAVTNRAGFSTFLMADHPFAFVIR--DANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpinb9bNP_035582.1 SERPIN 4..377 CDD:294093 123/364 (34%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 122/361 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

Return to query results.
Submit another query.