DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp4 and btd

DIOPT Version :9

Sequence 1:NP_033265.4 Gene:Sp4 / 20688 MGIID:107595 Length:782 Species:Mus musculus
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:486 Identity:157/486 - (32%)
Similarity:212/486 - (43%) Gaps:105/486 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse   363 PAATESEAQSSSQLQSNGIQNAQDQSNSLQQVQIVGQPILQQIQ------IQQPQQQIIQAIPPQ 421
            |.|.:.:||.....|..  |:||.|.:.|.         :||.|      .||.|||.:|.:..|
  Fly    11 PYAQQHQAQQQQHAQHQ--QHAQQQQHHLH---------MQQAQHHLHLSHQQAQQQHMQHLTQQ 64

Mouse   422 SFQLQSGQTIQTIQQQPLQNVQLQA---VNPTQVLIRAPTL--TPSGQISWQT---------VQV 472
            ..|.|..|..|..|||..|..|.|.   ::...:|...|:|  :.||..|..:         :::
  Fly    65 QQQQQQQQQQQQQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLEL 129

Mouse   473 QNIQSLS------NLQVQNAGLSQQL--TITP--------VSSSGGTTLAQIAPV------AVAG 515
            ...|:.|      |..:|:|..|..:  :|.|        :|:|..|....:||.      |:||
  Fly   130 PYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAG 194

Mouse   516 API----TLNTAQLASVPNLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQQATIAPV 576
            :|.    :.:.|..|:.......:.|:||||.|        .::..|......|:...::.....
  Fly   195 SPTSSSPSSSAASAAAAAAAAAAAAADLGAAAV--------ASAAYGWNTAYSGLGPARSQFPYA 251

Mouse   577 TVAVGGIANATIGAVS-------PDQLTQVHLQQ---GQQTSDAEVQPGKRLRRVACSCPNC-RE 630
            ..|.....|| :|..|       .::|.|....|   |....|...|...:.|.|.|:|||| .|
  Fly   252 QYASDYYGNA-VGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNE 315

Mouse   631 GEGR----GSSEPGKKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDE 691
            ..|.    |..|.| :|||:|||.||.::|||.|||:.|||||||||||:|  :.|||||:||||
  Fly   316 MSGLPPIVGPDERG-RKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDE 377

Mouse   692 LQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDSSVTEVLGSP 756
            ||||.||||..:.:.||.|||:|.||||||||.|||...|.....||.....:            
  Fly   378 LQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQ------------ 430

Mouse   757 RIVTVAAI------SQDSNPATPNVSTNMEE 781
               ..|||      .:...|.||.|....|:
  Fly   431 ---AAAAIKLEKKEKKSGKPLTPPVEFKQEQ 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp4NP_033265.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..148
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..385 6/21 (29%)
9aaTAD, inactive. /evidence=ECO:0000250|UniProtKB:Q02446 465..473 1/16 (6%)
C2H2 Zn finger 647..669 CDD:275368 14/21 (67%)
COG5048 <660..731 CDD:227381 49/70 (70%)
zf-H2C2_2 661..688 CDD:290200 19/26 (73%)
C2H2 Zn finger 677..699 CDD:275368 15/21 (71%)
zf-H2C2_2 691..714 CDD:290200 14/22 (64%)
zf-C2H2 705..727 CDD:278523 15/21 (71%)
C2H2 Zn finger 707..727 CDD:275368 15/19 (79%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 11/18 (61%)
zf-H2C2_2 349..374 CDD:290200 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:290200 15/24 (63%)
zf-C2H2 391..413 CDD:278523 15/21 (71%)
C2H2 Zn finger 393..413 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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