DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and btd

DIOPT Version :9

Sequence 1:NP_038700.2 Gene:Sp1 / 20683 MGIID:98372 Length:781 Species:Mus musculus
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_038700.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95
Repressor domain. /evidence=ECO:0000250 2..84
Transactivation domain A (Gln-rich). /evidence=ECO:0000250 145..250
Transactivation domain B (Gln-rich). /evidence=ECO:0000250 260..494
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..300
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..395
9aaTAD. /evidence=ECO:0000250|UniProtKB:P08047 461..469
Transactivation domain C (highly charged). /evidence=ECO:0000250 495..608
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..595
VZV IE62-binding. /evidence=ECO:0000250 617..781
C2H2 Zn finger 626..648 CDD:275368
COG5048 <639..710 CDD:227381
zf-H2C2_2 640..667 CDD:290200
C2H2 Zn finger 656..678 CDD:275368
zf-H2C2_2 670..693 CDD:290200
zf-C2H2 684..706 CDD:278523
C2H2 Zn finger 686..706 CDD:275368
Domain D. /evidence=ECO:0000250 706..781
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368
zf-H2C2_2 349..374 CDD:290200
C2H2 Zn finger 365..385 CDD:275368
zf-H2C2_2 377..402 CDD:290200
zf-C2H2 391..413 CDD:278523
C2H2 Zn finger 393..413 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.