DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox9 and Sox15

DIOPT Version :9

Sequence 1:NP_035578.3 Gene:Sox9 / 20682 MGIID:98371 Length:507 Species:Mus musculus
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:595 Identity:151/595 - (25%)
Similarity:210/595 - (35%) Gaps:158/595 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    19 SGAPSPTMSEDSAGSPCPSGS------------GSDTEN---TRPQENTFPKGEPDLKKESEEDK 68
            |.:|.|.:|....|....|||            |:...|   :.|.......|...:  |.....
  Fly   101 SHSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQM--EDCTSH 163

Mouse    69 FPVCIREAVSQVLKGYDWTLV-----------PMPV----RVNGS---SKNKPHVKRPMNAFMVW 115
            .|:   ||.|.....|...|.           |:|.    |..|:   |..:..::|||||||||
  Fly   164 SPI---EAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVW 225

Mouse   116 AQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK 180
            |:..|:||||:.|.||||:|||.|||.||.|...::||:|||||||||.|..:||:|||:|||||
  Fly   226 AKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRK 290

Mouse   181 SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPP---TPP---- 238
            ..|. :|......||:..|||                      ||  :|.|:..|   |||    
  Fly   291 QSKL-RAMQPGGKEQSESSPN----------------------PG--TGGSKSNPKLATPPLATA 330

Mouse   239 ----TTPKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLP 299
                ||| ||........:..|:....|..:.|:   .......|.|..||.   |..|..:.|.
  Fly   331 SSSYTTP-TDESTCNSTNQNHGQSTPGGLYEQPL---KPTYSPSSVDCYSNA---DSTEQIESLA 388

Mouse   300 PNGHPGVPATHGQVTYTGSYGISSTAPTPATAGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA 364
            .|..|.:              ::.::||.....:..:.| :...|.|.:..::.|...|..:::.
  Fly   389 ANCPPAL--------------LNESSPTGGGYDNSLLLK-KLTKPSPSRAAKSRQEKLAKSEEKN 438

Mouse   365 PPQQPQAPQQQQAHTLT-----------------TLSSEPGQSQRTH-IKTEQLSPSHYSEQQQH 411
            ...|.|...||..:..|                 ...:..|.....| :|.....|...||....
  Fly   439 KGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNS 503

Mouse   412 SPQQISYSPF----NLPHYSPS-----YPPITRSQYDYADHQN-----------SGSYYSHAAGQ 456
            :..:.|.|..    |:...:||     .|....|.|..:...|           ||:.|..:|..
  Fly   504 TSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANA 568

Mouse   457 GSGLYSTF--------TYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQ--------------- 498
            ....|..|        .|...|.....|.....||...:....:.|:::.               
  Fly   569 YGMQYEDFLRYQSNDMDYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSNAMLPATA 633

Mouse   499 -PVYTQLTRP 507
             ..||||..|
  Fly   634 ASYYTQLPYP 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox9NP_035578.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 13/62 (21%)
Sox_N 22..94 CDD:315171 20/101 (20%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 63..103 12/57 (21%)
PQA. /evidence=ECO:0000250|UniProtKB:P48436 63..103 12/57 (21%)
SOX-TCF_HMG-box 104..174 CDD:238684 44/69 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..271 38/121 (31%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 224..307 25/93 (27%)
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 275..284 2/8 (25%)
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 290..298 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..429 19/115 (17%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 392..507 30/159 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..507 7/45 (16%)
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 45/70 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.