DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox8 and Sox15

DIOPT Version :9

Sequence 1:NP_035577.1 Gene:Sox8 / 20681 MGIID:98370 Length:464 Species:Mus musculus
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:585 Identity:156/585 - (26%)
Similarity:210/585 - (35%) Gaps:192/585 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    47 GGGRG--------DTAEAA-----DERFPACIRDAVSQVLKGYDWSLVPMPV----RGGGGGTLK 94
            |||.|        ...|||     |.:...|..:.      ||.....|:|.    |.||..:..
  Fly   151 GGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNC------GYLERHKPLPADLKYRPGGTQSKS 209

Mouse    95 AK-PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQ 158
            || ..::||||||||||:..|:||||:.|.||||:|||.|||.||.|:..::||:|||||||||.
  Fly   210 AKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVI 274

Mouse   159 HKKDHPDYKYQPRRRKSVKT------GRSDSDSGTELGHHPGG----------PMYKADAVLGEA 207
            |..:||:|||:|||||..|.      |:..|:|....|  .||          |:..|.:.....
  Fly   275 HMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPG--TGGSKSNPKLATPPLATASSSYTTP 337

Mouse   208 HHHSD-HHTGQTHGPPTP---------PTTPKTDLHQASNG------------------------ 238
            ...|. :.|.|.||..||         ||...:.:...||.                        
  Fly   338 TDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPT 402

Mouse   239 -----------------------------SKQELRLEGRRLVDSGRQNIDFSNVDISELSSEVI- 273
                                         :|.|.:.:|.:.....:|.|..:...::..|..|: 
  Fly   403 GGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVA 467

Mouse   274 ------------------SNMDTF----DVHEFDQYLPL-NGHSALPTEPSQATASGSYGG---- 311
                              |...||    .|.|.|....: |..|||....:..|::.|..|    
  Fly   468 ARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMP 532

Mouse   312 ----ASYSHSGATGIG-----ASPVWAHKGAPSASASPTEAGP-LRPQIKTEQLSPS---HYNDQ 363
                :||:.|.|...|     .:.:..::..|||:|...:... ||.|......|.|   |....
  Fly   533 TSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFLRYQSNDMDYSTSAVEHKETT 597

Mouse   364 SHGSPGR---------ADYGSYSAQASVTTAASATAASSFASAQCDYTDLQA------------- 406
            |..:.|:         .:|..|.|:|.......|||||.:.......|.|.|             
  Fly   598 SDSASGQKCLKYPDTNQNYDDYEAEAYSNAMLPATAASYYTQLPYPPTSLAAFPLQLAVPFQQTT 662

Mouse   407 ----------SNY--YSPYPGY-------PPSLYQYPYFHSSRRPYASPLLNGLSMPPAHSPSSN 452
                      |.|  |..|.||       |.:  |.|..|......|.|   .||:||..:.:||
  Fly   663 SGAYGAQPIQSGYLHYGNYGGYEGMAQSQPQN--QAPVHHQQASHSAPP---SLSVPPNQTVTSN 722

Mouse   453  452
              Fly   723  722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox8NP_035577.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 4/15 (27%)
Sox_N 18..86 CDD:315171 13/55 (24%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P57073 55..97 14/51 (27%)
SOX-TCF_HMG-box 98..168 CDD:238684 44/69 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..244 37/168 (22%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P57073 221..299 23/163 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..315 7/30 (23%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P57073 347..464 37/150 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..374 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..464 4/9 (44%)
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 45/70 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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