DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox4 and Sox15

DIOPT Version :9

Sequence 1:NP_033264.2 Gene:Sox4 / 20677 MGIID:98366 Length:440 Species:Mus musculus
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:458 Identity:112/458 - (24%)
Similarity:184/458 - (40%) Gaps:124/458 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    36 PGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLL 100
            ||.|.|...|          ...|:|||||||||::|||:|:.:::||:|||::||.|||:|:.|
  Fly   202 PGGTQSKSAK----------ESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256

Mouse   101 KDSDKIPFIQEAERLRLKHMADYPDYKYRPRKKVKSGNAGAGSAATAKPGEKGDKVAGSSGHAGS 165
            ...|:.|:::||||||:.||.::|:||||||::.:|      .....:||  |.:.:.||.:.|:
  Fly   257 TPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQS------KLRAMQPG--GKEQSESSPNPGT 313

Mouse   166 SHAGGGAGGSSKPAPKKSCGPKVAGS-------------SVGKPHAKLVPAG--GSKAAASFSP- 214
                    |.||..||.:..|....|             |..:.|.:..|.|  ......::|| 
  Fly   314 --------GGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPS 370

Mouse   215 -----------EQAALLPLGEPTAVYKVRTPSAATPAASSSPSSALATPAKHPADKKVKRVYLFG 268
                       ||...|....|.|:.     :.::|......:|.|......|:..:        
  Fly   371 SVDCYSNADSTEQIESLAANCPPALL-----NESSPTGGGYDNSLLLKKLTKPSPSR-------- 422

Mouse   269 SLGASASPVGGLGASADPSDPLGLYEDGGPGCSPDGRSLSGRSSAASSPAASRSPA--------- 324
                         |:....:.|...|:...|....|:|..| ..||:.|.|..|.|         
  Fly   423 -------------AAKSRQEKLAKSEEKNKGSQSQGQSQQG-IYAATYPLAPTSVAVVAARGMYV 473

Mouse   325 --------DHRGYASLRAASPAPSSAPSHASSSLSSSSS-------------SSSGSSSSDDEFE 368
                    || |::......|..|.:....|:|:.:|.|             ||||.:....|..
  Fly   474 TCNNRGLLDH-GHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMS 537

Mouse   369 DDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSH-FEFPDYCTPEVSEMISGDWLESS 432
            ...:.:..:.....:|:...|.:..|         |.:.:: .::.|:...:.::|   |:..|:
  Fly   538 SYTVSMADNCGNLRLSMNELSGNEYL---------PSANAYGMQYEDFLRYQSNDM---DYSTSA 590

Mouse   433 ISN 435
            :.:
  Fly   591 VEH 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox4NP_033264.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 5/21 (24%)
SOX-TCF_HMG-box 58..129 CDD:238684 39/70 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..211 22/97 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..258 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..382 27/139 (19%)
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 39/70 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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