DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERBB4 and let-23

DIOPT Version :10

Sequence 1:XP_016859066.1 Gene:ERBB4 / 2066 HGNCID:3432 Length:1349 Species:Homo sapiens
Sequence 2:NP_001300607.1 Gene:let-23 / 174462 WormBaseID:WBGene00002299 Length:1335 Species:Caenorhabditis elegans


Alignment Length:1482 Identity:400/1482 - (26%)
Similarity:608/1482 - (41%) Gaps:413/1482 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    27 SVCAGTENKLSS------LSDLEQQYRALRKYYENCEVVMGNLEITSIEHN-------------- 71
            |||:||.|.:|.      |.|||..||..|:.|       ||||||.||.|              
 Worm    50 SVCSGTTNGISRYGTGNILEDLETMYRGCRRVY-------GNLEITWIEANEIKKWRESTNSTVD 107

Human    72 --------RDLSFLRSVREVTGYVLVALNQFRYLPLENLRIIRGTKLYEDRYALAIFLNYRKDGN 128
                    :.::|..::.|:.|.:::.....:.:....||:|.|.:::.|. ||.|..|.:    
 Worm   108 PKNEDSPLKSINFFDNLEEIRGSLIIYRANIQKISFPRLRVIYGDEVFHDN-ALYIHKNDK---- 167

Human   129 FGLQELGLKNLTEILNGGVYVDQNKFLCY-ADTIHWQDIVRNPWPSNLTLVSTNGSSGCLAHQDT 192
              :.|:.::.|..|.||.|.:..|..:|| .|.|.|::::.:|   ::..|.|..|     ||..
 Worm   168 --VHEVVMRELRVIRNGSVTIQDNPKMCYIGDKIDWKELLYDP---DVQKVETTNS-----HQHC 222

Human   193 EKNNPQLLQSLQPFSLITPGGRCHKSCTGRCWGPTENHCQTLTRTVCAEQCDGRCYGPYVS--DC 255
            .:|...:             .:||:||..:|||..:|.||.:.|:||.:.|....|....|  :|
 Worm   223 YQNGKSM-------------AKCHESCNDKCWGSGDNDCQRVYRSVCPKSCSQCFYSNSTSSYEC 274

Human   256 CHRECAGGCSGPKDTDCFACMNFNDSGACVTQCPQTFVYNPTTFQLEHNFNAKYTYGAFCVKKCP 320
            |...|.|||:|....:|.||..:...|.|:..||...::|..|.:|..|.:.:|..|..|||:||
 Worm   275 CDSACLGGCTGHGPKNCIACSKYELDGICIETCPSRKIFNHKTGRLVFNPDGRYQNGNHCVKECP 339

Human   321 HNFVVDSSSCVRACPSSKMEVEENGIKMCKPC-TDICPKACDGIGTGSLMSAQTVD----SSNID 380
            ...::::..|||.|...........::.|:.| :..|||.|            |||    :..:.
 Worm   340 PELLIENDVCVRHCSDGHHYDATKDVRECEKCRSSSCPKIC------------TVDGHLTNETLK 392

Human   381 KFINCTKINGNLIFLVTGIHGDPYNAIE-AIDPEKLNVFRTVREITGFLNIQSWPPNMTDFSVFS 444
            ....|.:|:|:||             || |...|:|.|..||:.::.::.|..  .|..|.....
 Worm   393 NLEGCEQIDGHLI-------------IEHAFTYEQLKVLETVKIVSEYITIVQ--QNFYDLKFLK 442

Human   445 NLVTIGGRVLYS-GLSLLILKQQGITSLQFQSLKEISAGNIYITDNSNLCYYHTINWTTLFSTIN 508
            ||..|.||.|:: ..:|.|.:...:..|...|||.|..|.:.|..|..|||...|:|:::.::..
 Worm   443 NLQIIEGRKLHNVRWALAIYQCDDLEELSLNSLKLIKTGAVLIMKNHRLCYVSKIDWSSIITSKG 507

Human   509 Q----RIVIRDNRKAENCTAEGMVCNHLCSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEF 569
            :    .:.|.:||.::.|..|..||:..|:..||||..|:.||.|:.:.....|:|.|:...  |
 Worm   508 KDNKPSLAIAENRDSKLCETEQRVCDKNCNKRGCWGKEPEDCLECKTWKSVGTCVEKCDTKG--F 570

Human   570 REFENGSICVECDPQCEKMEDGLLTCHGPGPDNCTKCSH-------FKDGPNCVEKCPDGLQGAN 627
            ...:....|..|.|:||       ||:|.|..:|..|.|       |.:...||..||       
 Worm   571 LRNQTSMKCERCSPECE-------TCNGLGELDCLTCRHKTLYNSDFGNRMECVHDCP------- 621

Human   628 SFIFKYADPDRECHPCHPNC--------------------------------------------- 647
              :..:......|..|||.|                                             
 Worm   622 --VSHFPTQKNVCEKCHPTCYDNGCTGPDSNLGYGGCKQCKYAVKYENDTIFCLQSSGMNNVCVE 684

Human   648 ------------TQGCIGSSIEDC---------IG-----------------------LMDRCNG 668
                        |:|.|.:..|.|         .|                       .||:|  
 Worm   685 NDLPNYYISTYDTEGVIETHCEKCSISCKTCSSAGRNVVQNKCVCKHVEYQPNPSERICMDQC-- 747

Human   669 PTS----------------HDC--IYYPWTGHST-------------------------LP---- 686
            |.:                |:|  .|:...|.||                         ||    
 Worm   748 PVNSFMVPDTNNTVCKKCHHECDQNYHCANGQSTGCQKCKNFTVFKGDIAQCVSECPKNLPFSNP 812

Human   687 ------------QHARTPLIAAG-VIGG-----LFILVIVGLTFAVYVRRKSIKKKRALRRFLET 733
                        :..:|.::..| |:.|     ||||:       ||.|.:.|.||..:...::.
 Worm   813 ANGECLDYDIASRQRKTRMVIIGSVLFGFAVMFLFILL-------VYWRCQRIGKKLKIAEMVDM 870

Human   734 ELVEPLTPSGTAPNQAQLRILKETEL--KRVKVLGSGAFGTVYKGIWVPE-GETVKIPVAIKILN 795
            ..:.|:..| ..||.:::.::..:||  |..|.||:||||||:.||:.|: .:.||||||||:..
 Worm   871 PELTPIDAS-VRPNMSRICLIPSSELQTKLDKKLGAGAFGTVFAGIYYPKRAKNVKIPVAIKVFQ 934

Human   796 ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQ 859
              |......|.::||..|..:.|.:|::::|.|: ...:::||...|.|.|..::..||:|:|::
 Worm   935 --TDQSQTDEMLEEATNMFRLRHDNLLKIIGFCMHDDGLKIVTIYRPLGNLQNFLKLHKENLGAR 997

Human   860 LLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 924
            ..:.:|.|||.||.|||::|:||||||.||||||..|||:||||||:::|:.|........||:.
 Worm   998 EQVLYCYQIASGMQYLEKQRVVHRDLATRNVLVKKFNHVEITDFGLSKILKHDADSITIKSGKVA 1062

Human   925 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTID 989
            |||:|:|......:||.||||::|||.||::|||..||.|:.|..|.:.|:.|.||.|||.|:.|
 Worm  1063 IKWLAIEIFSKHCYTHASDVWAFGVTCWEIITFGQSPYQGMSTDSIHNFLKDGNRLSQPPNCSQD 1127

Human   990 VYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQNLLDEED- 1053
            :|..:::|||.|..|||.|:.|...|....:.||.:|            .|.:|..::.|..|: 
 Worm  1128 LYQELLRCWMADPKSRPGFEILYERFKEFCKVPQLFL------------ENSNKISESDLSAEER 1180

Human  1054 -----LEDMMDAEEYLVPQAFNIPPPIYTSRARIDSNRSEIGHSPPPAYTPMSGNQFVYRDGGFA 1113
                 :.:|.|.         ||.|.:|..:          |..|....:|.|...|....|...
 Worm  1181 FQTERIREMFDG---------NIDPQMYFDQ----------GSLPSMPSSPTSMATFTIPHGDLM 1226

Human  1114 AE-QGVSVPYRAPTSTIPEAPVAQGATAEIFDDSCCNGTLRKPVAPHVQEDSSTQRYSADPTVFA 1177
            .. |.|:      :|.....|...|:||                    |||:|   |....|   
 Worm  1227 NRMQSVN------SSRYKTEPFDYGSTA--------------------QEDNS---YLIPKT--- 1259

Human  1178 PERSPRGELDEEGYM-TPMRDKPKQEYLNPVEENPFVSRRKNGDLQALDNPEYHNASNGPPKAED 1241
                  .|:.:...: |.:.::..|..|:|          .|||        |:|..| .|.:..
 Worm  1260 ------KEVQQSAVLYTAVTNEDGQTELSP----------SNGD--------YYNQPN-TPSSSS 1299

Human  1242 EYVNEPLYLNTFANTLGKAEYLKNNILSMPEKAKKAFDNPDYWNHSLPPRST 1293
            .|.|||              :||.   ..||.:::| :...|.|..:..:.|
 Worm  1300 GYYNEP--------------HLKT---KKPETSEEA-EAVQYENEEVSQKET 1333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERBB4XP_016859066.1 Recep_L_domain 55..167 CDD:460032 33/134 (25%)
Furin-like 215..358 CDD:395614 48/145 (33%)
Recep_L_domain 384..504 CDD:460032 37/121 (31%)
GF_recep_IV 528..660 CDD:464344 42/204 (21%)
TM_ErbB4 683..726 CDD:213053 18/89 (20%)
PTKc_HER4 751..1053 CDD:173655 126/305 (41%)
let-23NP_001300607.1 Recep_L_domain 77..205 CDD:460032 35/141 (25%)
Furin-like 229..378 CDD:395614 48/161 (30%)
Recep_L_domain 396..503 CDD:460032 37/121 (31%)
GF_recep_IV 531..652 CDD:464344 37/138 (27%)
FU 702..752 CDD:214589 7/51 (14%)
FU 759..806 CDD:214589 6/46 (13%)
PK_Tyr_Ser-Thr 898..1153 CDD:462242 117/256 (46%)

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