DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERBB3 and erbb3a

DIOPT Version :10

Sequence 1:NP_001973.2 Gene:ERBB3 / 2065 HGNCID:3431 Length:1342 Species:Homo sapiens
Sequence 2:XP_005165758.1 Gene:erbb3a / 386635 ZFINID:ZDB-GENE-030916-3 Length:1438 Species:Danio rerio


Alignment Length:1470 Identity:750/1470 - (51%)
Similarity:934/1470 - (63%) Gaps:176/1470 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     7 LQVLGLLFSL---ARGS------EVGNSQAVCPGTLNGLSVTGDAENQYQTLYKLYERCEVVMGN 62
            ||::.:..:|   ||..      |||    ||.||.|.|||||.:|.||:.:.::|..|::|:||
Zfish    11 LQMIAMCLALRSPARAQTQEGKPEVG----VCTGTQNLLSVTGSSEVQYKLMKEMYTGCQIVIGN 71

Human    63 LEIVLTGHNADLSFLQWIREVTGYVLVAMNEFSTLPLPNLRVVRGTQVYDGKFAIFVMLNYNTNS 127
            |||....||.|.||||.|||||||:|:|:|:|..|||..|||:|||.:|:.|||:.|::||..:.
Zfish    72 LEITQMEHNRDFSFLQSIREVTGYILIAINQFRRLPLEQLRVIRGTSLYEDKFALAVLVNYQKDG 136

Human   128 SHALRQLRLTQLTEILSGGVYIEKNDKLCHMDTIDWRDIVRDRDAEIVVKDNGRSCPPCHEVCKG 192
            .:.||:|.||.|||||.|||.|.:|..|.:...|:|:|||::..||::::|||... ||||.|.|
Zfish   137 VYGLRELGLTHLTEILEGGVQIIQNKFLSYAPQINWQDIVKNSGAEVIIQDNGPEV-PCHESCGG 200

Human   193 RCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFNDSGACVP 257
            .|||||::.||.||||:||.|||..|||.:|::|||:||||||:||.||||||||:||:||:||.
Zfish   201 PCWGPGNDTCQILTKTVCALQCNVRCFGRSPSECCHNECAGGCTGPLDTDCFACRNFNNSGSCVS 265

Human   258 RCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRACPPDKMEVDKNGLKMCEP 322
            :||:..:|||:||::||||:.|||:|.:||:.||.|||||.:|||.:||.|||||||.|:|.||.
Zfish   266 QCPRADIYNKVTFKMEPNPNAKYQFGSMCVSHCPPNFVVDGSSCVSSCPADKMEVDKTGVKRCEK 330

Human   323 CGGLCPKACEGTGSG--SRFQTVDSSNIDGFVNCTKILGNLDFLITGLNGDPWHKIPALDPEKLN 385
            |.|||||||.|||:|  || |||||.|||.|:|||||.|:|.||:||:.||.::.|.||||:||.
Zfish   331 CEGLCPKACVGTGTGTASR-QTVDSQNIDSFINCTKIQGSLHFLVTGIKGDSYNNISALDPKKLK 394

Human   386 VFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLY-----NRGFSLLIMKNLNVTSLGFRS 445
            :|.||||||..|:|||||..:.:.||||||.||.||:||     .||:|||:||...:.|||.||
Zfish   395 IFNTVREITDILSIQSWPEELEDLSVFSNLATIQGRTLYRGVSSKRGYSLLVMKIPTLKSLGLRS 459

Human   446 LKEISAGRIYISANRQLCYHHSLNWTKVL-RGP----TEERLDIKHNRPRRDCVAEGKVCDPLCS 505
            ||.||.|.|||:.|.||||||::|||::. .||    .::.||||.|||:..|..||.|||||||
Zfish   460 LKRISDGGIYITGNTQLCYHHTVNWTRLFGSGPRALRRQKSLDIKENRPQEQCKLEGHVCDPLCS 524

Human   506 SGGCWGPGPGQCLSCRNYSRGGVCVTHCNFLNGEPREFA-HEAECFSCHPECQPMEGTATCNGSG 569
            |.|||||||.|||||:|:.|||.||..|||::||.|||| .:.||.:||.||...:...||.|.|
Zfish   525 SEGCWGPGPDQCLSCKNFRRGGTCVPDCNFMSGEQREFAGPKNECMACHQECALQDSGDTCKGPG 589

Human   570 SDTCAQCAHFRDGPHCVSSCPHGVLGAKG-PIYKYPDVQNECRPCHENCTQGCKGPELQDCLGQT 633
            ||.|..|||.:|||:||||||.||.|..| .|||:|:.||:|:|||.|||.||.||...||:..:
Zfish   590 SDECKACAHLQDGPYCVSSCPEGVQGENGLIIYKFPNRQNKCQPCHANCTLGCLGPGQNDCVDSS 654

Human   634 LVLIGKTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRIQNKRAMRRYLERGESIEPLDPSEKANK 698
            ....|.....:.|:||..:::.|.:...:.||.|...|:.||||||||:.|||.|||:|.||..|
Zfish   655 RSSAGLPVTAIVLSVIFCVLLAFSVFVLSVLYRRSLSIRRKRAMRRYLQSGESFEPLEPGEKGVK 719

Human   699 VLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 763
            |.|||.:.:||:|:|:||||||||||||:|||||:::||||.||.|:|::|||:||.:||||||:
Zfish   720 VHARILRTSELKKIKLLGSGVFGTVHKGIWIPEGDTVKIPVAIKTIQDRTGRQTFQEITDHMLAM 784

Human   764 GSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 828
            ||||||:|||:||:|||:|||||||..|.||||||:||.|..|.||.||||.||||||||||||.
Zfish   785 GSLDHAYIVRILGICPGASLQLVTQLSPQGSLLDHIRQRRDNLNPQRLLNWCVQIAKGMYYLEEQ 849

Human   829 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSD 893
            .||||||||||:||||...||:||:|:||||.||:|:..::|.||||||||||||.|.:||||||
Zfish   850 RMVHRNLAARNILLKSDLIVQIADYGIADLLYPDEKKYFFNEIKTPIKWMALESILFRRYTHQSD 914

Human   894 VWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTF 958
            ||||||||||:|::|||||:.:|..:|||||||||||:||||||||||||||||||||||:||||
Zfish   915 VWSYGVTVWEMMSYGAEPYSAMRPQDVPDLLEKGERLSQPQICTIDVYMVMVKCWMIDENVRPTF 979

Human   959 KELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELEPELDLDLDLEAEEDNLA 1023
            ||||||||||||||.||||||.|.....:...|.|    :...|:::     |.:.||.::|.:.
Zfish   980 KELANEFTRMARDPHRYLVIKEEDRAPDSASDETH----QNGTEIDI-----LGVALEDQDDEVL 1035

Human  1024 TTTLGSALSL-PVGTLNRPR--GSQSLLSPS--SGYMPMNQGNLGESCQESAVSGSSERCPRPVS 1083
            ...:.:...: |..:.:|.|  ..:|.|:||  :||:||..| |..|.|....|.|.        
Zfish  1036 EDAIDAPRYITPSRSFSRLRIDSHRSSLTPSTTAGYLPMTPG-LESSVQTGWASRSR-------- 1091

Human  1084 LHPMPRGCLASESSEGHVTGS-EAELQEKVSMCRSRSRSRSPRPRGDSAYHSQRHSLLTPVTPLS 1147
               :...|..||||||.  |: |.|:.:..|...|..|.|.   |.||||.|||.||..|....|
Zfish  1092 ---LDSACTVSESSEGR--GALELEMNDDFSSVGSLRRVRH---REDSAYMSQRDSLSGPPETTS 1148

Human  1148 PPGLEEEDVNGYVMP---DTHLKGT---PSSREGTLS----SVGLSSVLGTEEEDEDEEYEYMN- 1201
            .....|||.|.||:|   ::..|.|   .||| .|||    |.|.|...........||||||| 
Zfish  1149 TGTQGEEDQNEYVLPGFGESPEKETLLFTSSR-STLSQKRLSRGHSGDFLEANRGAGEEYEYMNN 1212

Human  1202 --------------------RRR-----------RHSPPHPPRPSSLE----------------- 1218
                                |.|           .|.|..|.:.||:|                 
Zfish  1213 QTLSLSHIPGQLKEYNQRAPRNRSASFNPGGMYSNHKPSRPSKRSSIEGSESSGGLSQSSTDQRS 1277

Human  1219 ------------------ELGYEYMDVGSDLSASLGSTQSCPLH-PVPIM-PTAGTTP-----DE 1258
                              |:.|||||:..  :....:.....|| |.|:. |....:|     ||
Zfish  1278 HSDGDFLSSEAEYTDGDLEVEYEYMDIRG--AGGPAANMLLKLHLPRPVSNPPLRRSPEDDDEDE 1340

Human  1259 DYEYMNRQ---------RDGGGPGGDY------AAMGACPASEQ---GYEEMRAFQ---GPGHQA 1302
            ||:|.|.|         :.|||...:|      ||.||..|..|   |.:|.|...   ||....
Zfish  1341 DYQYSNHQPRLRNSLRVQGGGGEAYEYEDMDSLAAGGASGAEYQNLDGEDEERDEDWSGGPRSPG 1405

Human  1303 PHVHYARLKTLRSLEATDSAFDNPDYWHSRLFPKANAQRT 1342
            |:|..       ......:|||||||||||.|.|..|.||
Zfish  1406 PYVQV-------HAGTNHNAFDNPDYWHSRSFHKTKAVRT 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERBB3NP_001973.2 Recep_L_domain 56..167 CDD:460032 60/110 (55%)
Furin-like 183..329 CDD:395614 95/145 (66%)
Recep_L_domain 353..474 CDD:460032 75/125 (60%)
GF_recep_IV 499..630 CDD:464344 82/132 (62%)
TM_ErbB3 638..676 CDD:213056 10/37 (27%)
PTK_HER3 701..979 CDD:173656 211/277 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 980..999 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1033..1152 43/124 (35%)
erbb3aXP_005165758.1 Recep_L_domain 64..176 CDD:460032 60/111 (54%)
Furin-like 188..337 CDD:395614 97/149 (65%)
Recep_L_domain 362..488 CDD:460032 75/125 (60%)
GF_recep_IV 518..650 CDD:464344 81/131 (62%)
TM_ErbB3 662..697 CDD:213056 9/34 (26%)
PTK_HER3 722..1000 CDD:173656 211/277 (76%)

Return to query results.
Submit another query.