DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and CG9222

DIOPT Version :9

Sequence 1:NP_001158044.1 Gene:Snrk / 20623 MGIID:108104 Length:748 Species:Mus musculus
Sequence 2:NP_608999.2 Gene:CG9222 / 33867 FlyBaseID:FBgn0031784 Length:337 Species:Drosophila melanogaster


Alignment Length:263 Identity:90/263 - (34%)
Similarity:143/263 - (54%) Gaps:20/263 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    18 LDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLAT-GHLFQEVRCMKLVQHPNIVRLYEV 81
            |.|.:|.|::|.||:......|::||||:|.|.|..:..| ..|.:|:..:|.:.|.|::..|:.
  Fly    78 LGKVIGTGNYAKVKIGFSEEYGKRVAVKIISKVKAPSEYTQKFLPREIEAVKGLHHENLITFYQS 142

Mouse    82 IDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVV 146
            |:|..::|||::|.:.|.:.||: :..:.|:|..::..|.|:|.|:.|.|...|||||:|.||::
  Fly   143 IETSHRVYLIMQLAENGTLLDYV-RERKFLDEPQSRTLFKQLVSAVEYIHSKGVVHRDIKCENLL 206

Mouse   147 FFEKQGLVKLTDFGFSNKFQPGKKLTTS----------CGSLAYSAPEILLGDEYDAPAVDIWSL 201
            ..|...| ||.||||:.     |...||          |||.||::||||.|..||....|||:.
  Fly   207 LDENWNL-KLIDFGFAR-----KDTRTSDNQVILSKTFCGSYAYASPEILKGVAYDPFMSDIWAC 265

Mouse   202 GVILFMLVCGQPPFQEANDSETLTMI-MDCKYTVPPRVSAGCRDLITRMLQRDPKRRASLEEIES 265
            ||:.:.:|.|:.|:..:|....|..| ....:...|..|:.|:.:|..:| ...|.|.::.:::.
  Fly   266 GVVCYAMVFGRLPYDGSNVHILLKRINQSLVFPKSPSASSECKHMIMHIL-APVKIRYNIPQVKE 329

Mouse   266 HPW 268
            .||
  Fly   330 DPW 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_001158044.1 STKc_SNRK 12..269 CDD:270976 90/263 (34%)
UBA_SNRK 288..335 CDD:270524
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..415
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..640
CG9222NP_608999.2 STKc_TSSK4-like 75..333 CDD:271064 90/263 (34%)
S_TKc 78..332 CDD:214567 88/261 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.