DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sstr3 and AstC-R1

DIOPT Version :9

Sequence 1:NP_001343890.1 Gene:Sstr3 / 20607 MGIID:98329 Length:428 Species:Mus musculus
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:473 Identity:144/473 - (30%)
Similarity:228/473 - (48%) Gaps:100/473 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MATVTYPSSEPTTLDPGNASSTWPLDTTLGNTS------AGAS--------------------LT 39
            |..:.:...|.|.....||::.:..:.:|..|.      :|:|                    .|
  Fly     7 MDVLQFVKGEMTADSEANATNWYNTNESLYTTELNHRWISGSSTIQPEESLYGTDLPTYQHCIAT 71

Mouse    40 GLAVSGILISLVYLVVCVVGLLGNSLVIYVVLRHTSSPSVTSVYILNLALADELFMLGLPFLAAQ 104
            ..:.:.:...::|..||::||.||:||||||||.:...:||::||||||:|||.|::|:|||...
  Fly    72 RNSFADLFTVVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVADECFLIGIPFLLYT 136

Mouse   105 NALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVW 169
            ..:..|.||..||:..|....|..|||...|.:||.|||:||.||..|.|:||..:|:.|||..|
  Fly   137 MRICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTLHIAKVVSAIAW 201

Mouse   170 VASAVVVLPVVVFSGVPR---GMS-TCHMQWPEPAAAWR----TAFIIYTAALGFFGPLLVICLC 226
            ..|||::|||::::....   |:: :|::.||:   |::    |.||:||..|||..||..|...
  Fly   202 STSAVLMLPVILYASTVEQEDGINYSCNIMWPD---AYKKHSGTTFILYTFFLGFATPLCFILSF 263

Mouse   227 YLLIVVKVRSTTRRVRAPSCQWVQAPACQRRRRSERRVTRMVVAVVALFVLCWMPFYLLNIVNVV 291
            |.|::.|:||...:....|         :.:||:.|:|||:|:.|:::::|||:|.:    ::.|
  Fly   264 YYLVIRKLRSVGPKPGTKS---------KEKRRAHRKVTRLVLTVISVYILCWLPHW----ISQV 315

Mouse   292 CPLPEEPAFFGL-------YFLVVALPYANSCANPILYGFLSYRFKQGFRRILLRPSRRIRSQEP 349
            ..:...||...|       :.|:.||.|:||..|||||.|||..|::.|.:.....::       
  Fly   316 ALIHSNPAQRDLSRLEILIFLLLGALVYSNSAVNPILYAFLSENFRKSFFKAFTCMNK------- 373

Mouse   350 GSGPPEKTEEEEDEEEEERREEEERRMQRGQEMNGRL----SQIAQAGTS--GQQPRPCTGTAKE 408
                                          |::|.:|    |...:.|:.  |...|..|...:.
  Fly   374 ------------------------------QDINAQLQLEPSVFTKQGSKKRGGSKRLLTSNPQI 408

Mouse   409 QQLLPQEATAGDKASTLS 426
            ..|||..|...:.::|.|
  Fly   409 PPLLPLNAGNNNSSTTTS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sstr3NP_001343890.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 4/18 (22%)
7tm_GPCRs 46..333 CDD:391938 119/301 (40%)
TM helix 1 48..72 CDD:341315 13/23 (57%)
TM helix 2 81..102 CDD:341315 13/20 (65%)
TM helix 3 118..140 CDD:341315 7/21 (33%)
TM helix 4 163..179 CDD:341315 8/15 (53%)
TM helix 5 205..228 CDD:341315 11/22 (50%)
TM helix 6 262..287 CDD:341315 10/24 (42%)
TM helix 7 301..326 CDD:341315 13/31 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..428 14/89 (16%)
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 118/295 (40%)
7tm_1 94..353 CDD:278431 108/274 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 224 1.000 Domainoid score I2540
eggNOG 1 0.900 - - E33208_3BCR0
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 240 1.000 Inparanoid score I3329
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000463
OrthoInspector 1 1.000 - - mtm8844
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3938
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.990

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