Sequence 1: | NP_056563.2 | Gene: | Slit1 / 20562 | MGIID: | 1315203 | Length: | 1531 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246765.1 | Gene: | Toll-6 / 39663 | FlyBaseID: | FBgn0036494 | Length: | 1514 | Species: | Drosophila melanogaster |
Alignment Length: | 1079 | Identity: | 238/1079 - (22%) |
---|---|---|---|
Similarity: | 368/1079 - (34%) | Gaps: | 385/1079 - (35%) |
- Green bases have known domain annotations that are detailed below.
Mouse 10 SSGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCH--GTGLQAIPK------NIPRNTE-- 64
Mouse 65 -----------------RLELNGNNITRIHKNDFAGLKQLRVLQLMENQI------GAVERGAFD 106
Mouse 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFR--------GAT------ 157
Mouse 158 ---------------DLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKL 207
Mouse 208 RTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKGEFSCSGQGEAAGA 272
Mouse 273 PACTLSSGSCPAMCSCSSGIVDCRGKGLTAIPANL----PETMTEIRLELNGIKSIPPGAFSPYR 333
Mouse 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRP 398
Mouse 399 DAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTG 463
Mouse 464 ARCASPRRLANKRIGQIKSKKFR-CSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECS 527
Mouse 528 SLKLSKIPERIPQSTTELRLNNNEISILEAT---------GL--------------FKKLSHLKK 569
Mouse 570 INLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC------- 627
Mouse 628 -------IHNDSFTGLRN-------------------------------VRLLSLYDNHITTISP 654
Mouse 655 GAFDTLQALSTLNLLA-----------------------------NPFNCNCHLSWLGDWLRKRK 690
Mouse 691 IVTGN--PRCQNPDFL----------RQIPLQDVAFPDFRCEEGQ---------EEVGCLPRPQC 734
Mouse 735 PQECACL------DTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQ-------------- 779
Mouse 780 -----------LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRS 833
Mouse 834 LRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDC 872 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Slit1 | NP_056563.2 | LRRNT | 33..64 | CDD:214470 | 9/38 (24%) |
leucine-rich repeat | 43..62 | CDD:275380 | 6/26 (23%) | ||
LRR | <62..>219 | CDD:227223 | 56/210 (27%) | ||
LRR 1 | 62..83 | 4/39 (10%) | |||
leucine-rich repeat | 63..86 | CDD:275380 | 5/41 (12%) | ||
LRR 2 | 86..107 | 9/26 (35%) | |||
leucine-rich repeat | 87..110 | CDD:275380 | 8/28 (29%) | ||
LRR 3 | 110..131 | 9/20 (45%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 134..155 | 11/28 (39%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 13/51 (25%) | ||
LRR 5 | 158..179 | 5/20 (25%) | |||
LRR_8 | 159..217 | CDD:338972 | 18/57 (32%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 5/22 (23%) | ||
LRR 6 | 182..203 | 8/20 (40%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 8/22 (36%) | ||
PCC | 188..>328 | CDD:188093 | 17/143 (12%) | ||
leucine-rich repeat | 207..334 | CDD:275380 | 14/130 (11%) | ||
LRR 7 | 310..331 | 6/20 (30%) | |||
internalin_A | 311..>682 | CDD:380193 | 107/468 (23%) | ||
LRR 8 | 334..355 | 7/20 (35%) | |||
leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
LRR 9 | 358..379 | 2/20 (10%) | |||
leucine-rich repeat | 359..379 | CDD:275380 | 2/19 (11%) | ||
LRR 10 | 382..403 | 8/20 (40%) | |||
leucine-rich repeat | 383..406 | CDD:275380 | 10/22 (45%) | ||
LRR 11 | 406..427 | 7/20 (35%) | |||
leucine-rich repeat | 407..428 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 431..528 | CDD:275380 | 21/97 (22%) | ||
leucine-rich repeat | 529..566 | CDD:275380 | 11/59 (19%) | ||
LRR 12 | 541..562 | 6/43 (14%) | |||
LRR 13 | 566..587 | 7/20 (35%) | |||
leucine-rich repeat | 567..590 | CDD:275380 | 8/22 (36%) | ||
LRR 14 | 590..611 | 7/20 (35%) | |||
leucine-rich repeat | 591..614 | CDD:275380 | 6/22 (27%) | ||
LRR 15 | 614..635 | 5/34 (15%) | |||
leucine-rich repeat | 615..638 | CDD:275380 | 6/36 (17%) | ||
LRR 16 | 638..659 | 11/51 (22%) | |||
leucine-rich repeat | 639..660 | CDD:275380 | 10/20 (50%) | ||
PCC | 644..>730 | CDD:188093 | 30/135 (22%) | ||
leucine-rich repeat | 663..754 | CDD:275380 | 29/146 (20%) | ||
LRRNT | 733..765 | CDD:214470 | 9/37 (24%) | ||
leucine-rich repeat | 755..785 | CDD:275380 | 11/54 (20%) | ||
LRR_8 | 762..820 | CDD:338972 | 22/82 (27%) | ||
LRR 17 | 762..783 | 9/45 (20%) | |||
LRR 18 | 785..806 | 7/20 (35%) | |||
leucine-rich repeat | 786..809 | CDD:275380 | 8/22 (36%) | ||
LRR 19 | 809..830 | 6/20 (30%) | |||
leucine-rich repeat | 810..830 | CDD:275380 | 6/19 (32%) | ||
LRR 20 | 833..854 | 5/20 (25%) | |||
leucine-rich repeat | 834..857 | CDD:275380 | 5/22 (23%) | ||
PCC | 842..>1002 | CDD:188093 | 5/31 (16%) | ||
EGF_CA | 1005..1041 | CDD:238011 | |||
EGF_CA | 1044..1080 | CDD:238011 | |||
EGF_CA | 1085..1119 | CDD:238011 | |||
LamG | 1186..1319 | CDD:214598 | |||
Toll-6 | NP_001246765.1 | leucine-rich repeat | 148..171 | CDD:275380 | 4/22 (18%) |
LRR_8 | 171..236 | CDD:290566 | 24/64 (38%) | ||
leucine-rich repeat | 172..201 | CDD:275380 | 8/28 (29%) | ||
leucine-rich repeat | 202..278 | CDD:275380 | 22/75 (29%) | ||
leucine-rich repeat | 229..249 | CDD:275380 | 9/19 (47%) | ||
LRR_RI | 278..468 | CDD:238064 | 65/301 (22%) | ||
leucine-rich repeat | 279..302 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 301..386 | CDD:290566 | 28/167 (17%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 7/105 (7%) | ||
LRR | 350..729 | CDD:227223 | 102/442 (23%) | ||
leucine-rich repeat | 352..375 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 376..401 | CDD:275380 | 11/46 (24%) | ||
LRR_RI | <401..626 | CDD:238064 | 67/266 (25%) | ||
leucine-rich repeat | 402..425 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 426..449 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 450..473 | CDD:275380 | 10/34 (29%) | ||
leucine-rich repeat | 474..497 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 498..518 | CDD:275380 | 6/40 (15%) | ||
leucine-rich repeat | 521..544 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 545..566 | CDD:275380 | 3/20 (15%) | ||
leucine-rich repeat | 569..592 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 593..615 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 616..637 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 638..662 | CDD:275380 | 3/23 (13%) | ||
leucine-rich repeat | 663..684 | CDD:275380 | 0/20 (0%) | ||
leucine-rich repeat | 685..708 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 709..728 | CDD:275380 | 3/18 (17%) | ||
LRR_8 | 883..943 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 885..908 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 909..932 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 932..990 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 933..956 | CDD:275380 | 8/22 (36%) | ||
TIR | 1114..1247 | CDD:214587 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |