DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc5a1 and CG5687

DIOPT Version :9

Sequence 1:NP_062784.3 Gene:Slc5a1 / 20537 MGIID:107678 Length:665 Species:Mus musculus
Sequence 2:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:585 Identity:139/585 - (23%)
Similarity:248/585 - (42%) Gaps:116/585 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    18 PSYERIRNAADISVIVIYFVVVMAVGLWAMFSTNRGTVGGFFLAGRSMVWWPIGASLFASNIGSG 82
            ||::...:..|..:::...|:.:.:|::..|....|:....||.|..|..:|:..||..|.|.: 
  Fly    90 PSHKATFSGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNEFLLGSEMSIFPVTLSLTTSFITA- 153

Mouse    83 HFVGLAGTGAAAGIAMGGFEWNALVLVV--------VLGWIFVPIYIKAGVVTMPEYLRKRFGGK 139
              :.|.|..:..     .|:....||:|        |...||.|||.|..:.:..|||..|| ||
  Fly   154 --IELLGNPSEM-----YFQGTQFVLIVIPMVIVIPVAVKIFYPIYFKMELTSCYEYLGIRF-GK 210

Mouse   140 RIQIYLSVLSLL-LYIFTKISADIFSGAIFINLALGLDIYLAIFILLAITALYTITGGLAAVIYT 203
            .|:|..:||.:: :..:|.::  :.:.||.::.|.|||..:|:.::..:...|:..||:.||:..
  Fly   211 EIRILGAVLYVIQMCFYTAVA--VLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIA 273

Mouse   204 DTLQTAIMLVGSFILTGFAFNEVGGYEAFMDKYMKAIPTKVSNGNFTAKEECYTPRADSFHIFRD 268
            |:.|.|::.|...::.|            :..:....|.:|..   ||.:.   .|.:.|::..|
  Fly   274 DSFQAAVLAVSLVLIVG------------LGCFYSGNPIQVFQ---TASDH---NRLEFFNMDPD 320

Mouse   269 PITGDMPWPGLIFGLAILALWYW----CTDQVIVQRCLSAKN--MSHVKAGCTLCGYLKLLPMFL 327
            |.|....|..:|.|     .:||    ||:|..||:|:|.|:  ::.:..|..:.|   |:.:||
  Fly   321 PTTRHTVWSVVIGG-----FFYWTSLFCTNQASVQKCMSLKSLRLAKIALGFAIIG---LIVVFL 377

Mouse   328 MVMPGMISRILYTEKIACVLPEECQKYCGTPVGCTNIAYPTLVVELMP--NGLRGLMLSVMMASL 390
            :        ..||..:......:|.......:..|:...|..|:....  :.:.|:.::.:.|:.
  Fly   378 L--------NFYTGLMVFTHYADCDPLTAGRISATDQLLPYYVINTYEHISSVAGIFVAGIFAAS 434

Mouse   391 MSSLTSIFNSASTLFTMDIYT-----KI--RKKASEKELMIAGRLFILVLIGI-SIAWVPIVQSA 447
            :.::.|..||.|.:...|:..     ||  .|.|:..:.|..|       .|| |...|.||:  
  Fly   435 LGTVASALNSLSAVTCEDLLVNGMNIKISPEKGATYAKWMSLG-------FGIASFGLVFIVE-- 490

Mouse   448 QSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEQGAFWG----LILGFLIGISRMITEFAYGT 508
            ..|.:.....::...:|.....:|:|.|.||:.|.:|||:|    |.|...:|:...|..     
  Fly   491 HLGGVLQATLTLNGLIGGVTLGLFVLGIACKQANTKGAFYGGLLSLALVIFVGVVAQIVS----- 550

Mouse   509 GSCME----PSNCPKIICGVHYLYFAIILFVISVITILIISFLTKPIPDVH--------LYRLCW 561
               :|    |::..|..|.|:             :|.:|.|.||:|:..:.        ::||.:
  Fly   551 ---VEQPALPTSIDKCDCHVN-------------MTNIIGSLLTEPLEVIEEGGFTSWPIFRLSY 599

Mouse   562  561
              Fly   600  599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_062784.3 SLC5-6-like_sbd 27..665 CDD:294310 137/576 (24%)
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 137/576 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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